PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021673540.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 840aa MW: 96947.7 Da PI: 8.4273

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021673540.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.9	5.3e-26	97	205	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkkek.dgkw 76 +fY+eYAk+vGF + +++s++s+ +g++++++fvC+++g+++e + + +++ r +r+ ++t+Cka+++vk+++ dgkw XP_021673540.1 97 SFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGTKREPSMTemahpvmdtdvatsipvkRKRGRINRSWSKTDCKACMHVKRRQhDGKW 191 5**************************************9999999**********998888899**************99 PP FAR1 77 evtkleleHnHela 90 +v ++ +eHnH++ XP_021673540.1 192 VVRSFIKEHNHAIY 205 *********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 840 aa Download sequence
MFSMGIDLEQ PSGECHKEDS RPNVTADMVD SGLHDRNRVA VDCCNVAGTD KDRPTVSGRV 60 FDGTHKVYVG DGINLNAAKD LEPHDGMEFE SKEEAFSFYK EYAKSVGFAT IIKASRRSRI 120 SGKFIDAKFV CTRYGTKREP SMTEMAHPVM DTDVATSIPV KRKRGRINRS WSKTDCKACM 180 HVKRRQHDGK WVVRSFIKEH NHAIYPDQAY FFRGHRNIGL GSNNVDALHA IRARTKKVYV 240 SMSRQSGGYK KQENQKRSLT NISGSTQHLA LDEGDAQVML EHFRYMQDEN PNFFYAIDLN 300 EEQCLRNVFW VDAKARLDYG YFDDVIIFDT TYIKSEYKLP FAPFIGVNHH FQCLLLGCAL 360 VADETKSTYV WLMRAWLRAM GGLAPRVILT DQDKSLEQAI AEVFPNSHHC FCLWHLLSKI 420 PEKLGNVIRQ HENFMTKFNK CIFKSWTNEQ FEKRWWKMAE RFNLRNDLWF QSLYEDRQKW 480 MPMYMRDKFL AGMSTTQRSD SISSFFDKHM QRKTTLKEFL EQYKAILQGK FEEEAKADFE 540 SWHKQPGLKS PSPFGKQMAT LYTHAIFKKF QVEVLGVVAC HPRKDNEDGE TKTFKVQDFE 600 ENEDFIVVWK GTSSYFSCSC RSFEFNGFLC RHVLIVMQMS GVHSIPSQYI LKRWTKDAKS 660 RETSREQSEP NSPSPGRPHD YEEANHATGV SKTNKKDSIS RKKQVHSEPD VMSVGMHESW 720 QQLEQLNSRA PNLDGYFGPQ QIVQGMGQLN SIASSRDDYY SNEHSMQRLG QLNAIASIHE 780 AHFITQQRIQ GMGQLHCRSE TIPSCFDTHD GLQEMDQSNV GPSQLHSMVT KNLHPKRLSH

Sequence ? help Back to Top

Protein Sequence Length: 840 aa Download sequence

MFSMGIDLEQ PSGECHKEDS RPNVTADMVD SGLHDRNRVA VDCCNVAGTD KDRPTVSGRV  60
FDGTHKVYVG DGINLNAAKD LEPHDGMEFE SKEEAFSFYK EYAKSVGFAT IIKASRRSRI  120
SGKFIDAKFV CTRYGTKREP SMTEMAHPVM DTDVATSIPV KRKRGRINRS WSKTDCKACM  180
HVKRRQHDGK WVVRSFIKEH NHAIYPDQAY FFRGHRNIGL GSNNVDALHA IRARTKKVYV  240
SMSRQSGGYK KQENQKRSLT NISGSTQHLA LDEGDAQVML EHFRYMQDEN PNFFYAIDLN  300
EEQCLRNVFW VDAKARLDYG YFDDVIIFDT TYIKSEYKLP FAPFIGVNHH FQCLLLGCAL  360
VADETKSTYV WLMRAWLRAM GGLAPRVILT DQDKSLEQAI AEVFPNSHHC FCLWHLLSKI  420
PEKLGNVIRQ HENFMTKFNK CIFKSWTNEQ FEKRWWKMAE RFNLRNDLWF QSLYEDRQKW  480
MPMYMRDKFL AGMSTTQRSD SISSFFDKHM QRKTTLKEFL EQYKAILQGK FEEEAKADFE  540
SWHKQPGLKS PSPFGKQMAT LYTHAIFKKF QVEVLGVVAC HPRKDNEDGE TKTFKVQDFE  600
ENEDFIVVWK GTSSYFSCSC RSFEFNGFLC RHVLIVMQMS GVHSIPSQYI LKRWTKDAKS  660
RETSREQSEP NSPSPGRPHD YEEANHATGV SKTNKKDSIS RKKQVHSEPD VMSVGMHESW  720
QQLEQLNSRA PNLDGYFGPQ QIVQGMGQLN SIASSRDDYY SNEHSMQRLG QLNAIASIHE  780
AHFITQQRIQ GMGQLHCRSE TIPSCFDTHD GLQEMDQSNV GPSQLHSMVT KNLHPKRLSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein