PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021673737.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 712aa MW: 81036.5 Da PI: 9.2997

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021673737.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.3	3.5e-08	503	545	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT+eE el + ++++G++ Wkt a+ +g + + ++k+ w+ XP_021673737.1 503 KGSWTPEEYELVHKFHEKHGSD-WKTLAEALG--KHRIHVKDTWRR 545 799*****************.******9..566788888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 712 aa Download sequence
MGNKTGGRKG HEGEKMNNGV HSSKDVNACA NSSVVSTGEG LTLSNEHKKK KTKRHEANGD 60 DVELSATDTG AVGLDGDIDL SNHEIEKNRK KKKKRKSKKI NAESDVVSQK VRKRDKACDA 120 GWEIGASKEN LKEGRTGVGE KVSLQKDGKK YMERNFESGV LKYRKKKHKE KKSKDKNENG 180 RNHLDENIMD HDESARMERK QKKQQLIVNL EAKSLKLMAE TPGNFSNAIE ENGGNIDSGE 240 DENLGAHAFN AEDGRKDERK RKKRKRDKDV SDTGTMINEI NQKDVGNIME KVQHSRKKSK 300 KREKHNVDLA AALQETMNGK LGNKSNPMGE NEGNEYSIEN KVGGGKIEDH TVKKVKKKKK 360 VKSVVNGSEG KGSDREQRMG KGVEGTNPLE KSTLKGTSKR VSFSEEVEVF PLSDDGPSSN 420 TVQKEEVVRG KRFSHEEDEM VKEAVLNYMD AHGLGEEGLQ MVLNCKKYPE LKNCWKEIGA 480 ALPWRPYLSV YNRAHILFER DEKGSWTPEE YELVHKFHEK HGSDWKTLAE ALGKHRIHVK 540 DTWRRIKVIN RRRGKWSQDE YQNLFDLVNM DLRMKACEEM KSSKHGMLRD NICWTAISEK 600 LGTRATPMCC MKWYHQLTSP MVAEGKWLDV DDYHLVISLY NLDACCIEDV DWDNLLDHRS 660 GDLCRKRWNQ MVKHIGEHGN KSFADQVEIL IERYCPDVLE AREAYNSVPV VP

Sequence ? help Back to Top

Protein Sequence Length: 712 aa Download sequence

MGNKTGGRKG HEGEKMNNGV HSSKDVNACA NSSVVSTGEG LTLSNEHKKK KTKRHEANGD  60
DVELSATDTG AVGLDGDIDL SNHEIEKNRK KKKKRKSKKI NAESDVVSQK VRKRDKACDA  120
GWEIGASKEN LKEGRTGVGE KVSLQKDGKK YMERNFESGV LKYRKKKHKE KKSKDKNENG  180
RNHLDENIMD HDESARMERK QKKQQLIVNL EAKSLKLMAE TPGNFSNAIE ENGGNIDSGE  240
DENLGAHAFN AEDGRKDERK RKKRKRDKDV SDTGTMINEI NQKDVGNIME KVQHSRKKSK  300
KREKHNVDLA AALQETMNGK LGNKSNPMGE NEGNEYSIEN KVGGGKIEDH TVKKVKKKKK  360
VKSVVNGSEG KGSDREQRMG KGVEGTNPLE KSTLKGTSKR VSFSEEVEVF PLSDDGPSSN  420
TVQKEEVVRG KRFSHEEDEM VKEAVLNYMD AHGLGEEGLQ MVLNCKKYPE LKNCWKEIGA  480
ALPWRPYLSV YNRAHILFER DEKGSWTPEE YELVHKFHEK HGSDWKTLAE ALGKHRIHVK  540
DTWRRIKVIN RRRGKWSQDE YQNLFDLVNM DLRMKACEEM KSSKHGMLRD NICWTAISEK  600
LGTRATPMCC MKWYHQLTSP MVAEGKWLDV DDYHLVISLY NLDACCIEDV DWDNLLDHRS  660
GDLCRKRWNQ MVKHIGEHGN KSFADQVEIL IERYCPDVLE AREAYNSVPV VP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	95	NRKKKKKR
2	89	95	RKKKKKR
3	90	99	KKKKKRKSKK
4	90	116	KKKKKRKSKKINAESDVVSQKVRKRDK
5	90	96	RKKKKKR
6	91	117	KKKKKRKSKKINAESDVVSQKVRKRDK
7	91	96	KKKKRK
8	91	99	KKKKRKSKK
9	92	118	KKKKKRKSKKINAESDVVSQKVRKRDK
10	93	119	KKKKKRKSKKINAESDVVSQKVRKRDK
11	259	265	RKKKKKR
12	259	263	RKRKK
13	259	267	RKRKKRKRD
14	259	268	RKRKKRKRDK
15	259	304	RKRKKRKRDKDVSDTGTMINEINQKDVGNIMEKVQHSRKKSKKREK
16	260	266	RKKKKKR
17	260	305	RKRKKRKRDKDVSDTGTMINEINQKDVGNIMEKVQHSRKKSKKREK
18	261	266	RKKRKR
19	261	270	RKRKKRKRDK
20	261	306	RKRKKRKRDKDVSDTGTMINEINQKDVGNIMEKVQHSRKKSKKREK
21	262	307	RKRKKRKRDKDVSDTGTMINEINQKDVGNIMEKVQHSRKKSKKREK
22	263	308	RKRKKRKRDKDVSDTGTMINEINQKDVGNIMEKVQHSRKKSKKREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-136	MYB_related family protein