PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674370.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 375aa MW: 42165.9 Da PI: 6.4205

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.9	3.3e-15	68	127	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ k+ ++++lg ++ +e Aa ++ a++k++g XP_021674370.1 68 SIYRGVTRHRWTGRFEAHLWDkSSWNNiqnKKgRQVYLGAYDNEEAAAHTYDLAALKYWG 127 57*****************777799977447***********************98 PP
2	AP2	53.1	7.9e-17	170	222	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g+ XP_021674370.1 170 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYNTQEEAAAAYDMAAIEYRGA 222 89**99******99966...3.6***********************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MKRSPDSSCS SSSSSSYSSS ASSYCLCSDT PPNYHLLRSQ PNSKRVRRIQ KKQDKCQINA 60 TTSSRRSSIY RGVTRHRWTG RFEAHLWDKS SWNNIQNKKG RQVYLGAYDN EEAAAHTYDL 120 AALKYWGPDT TLNFPIETYS KELEEMQKMS KEEYLASLRR RSSGFSRGVS KYRGVARHHH 180 NGRWEARIGR VFGNKYLYLG TYNTQEEAAA AYDMAAIEYR GANAVTNFDI SNYIDRLKKK 240 GIPLNHILPA DPLLNCSIES EEAAAEADVE QSSSPSSPLP PQEEEQQTAS PKPQCTQLPT 300 CMDTSTMIVM DPIEEHELNW SFCLDSGLTP LPVLDLPLEN ASKLPSLFDD SGFEDNIDLI 360 FDACCFGNDG NRCGV

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MKRSPDSSCS SSSSSSYSSS ASSYCLCSDT PPNYHLLRSQ PNSKRVRRIQ KKQDKCQINA  60
TTSSRRSSIY RGVTRHRWTG RFEAHLWDKS SWNNIQNKKG RQVYLGAYDN EEAAAHTYDL  120
AALKYWGPDT TLNFPIETYS KELEEMQKMS KEEYLASLRR RSSGFSRGVS KYRGVARHHH  180
NGRWEARIGR VFGNKYLYLG TYNTQEEAAA AYDMAAIEYR GANAVTNFDI SNYIDRLKKK  240
GIPLNHILPA DPLLNCSIES EEAAAEADVE QSSSPSSPLP PQEEEQQTAS PKPQCTQLPT  300
CMDTSTMIVM DPIEEHELNW SFCLDSGLTP LPVLDLPLEN ASKLPSLFDD SGFEDNIDLI  360
FDACCFGNDG NRCGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-116	AP2 family protein