PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674378.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 372aa MW: 41790.4 Da PI: 6.4205

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674378.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.9	4.4e-12	68	124	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ ++k+ + g ++ +e Aa ++ a++k++g XP_021674378.1 68 SIYRGVTRHRWTGRFEAHLWDkSSWNNiQNKKGRQGAYDNEEAAAHTYDLAALKYWG 124 57*****************777799988888********************98 PP
2	AP2	53.1	7.8e-17	167	219	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g+ XP_021674378.1 167 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYNTQEEAAAAYDMAAIEYRGA 219 89**99******99966...3.6***********************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MKRSPDSSCS SSSSSSYSSS ASSYCLCSDT PPNYHLLRSQ PNSKRVRRIQ KKQDKCQINA 60 TTSSRRSSIY RGVTRHRWTG RFEAHLWDKS SWNNIQNKKG RQGAYDNEEA AAHTYDLAAL 120 KYWGPDTTLN FPIETYSKEL EEMQKMSKEE YLASLRRRSS GFSRGVSKYR GVARHHHNGR 180 WEARIGRVFG NKYLYLGTYN TQEEAAAAYD MAAIEYRGAN AVTNFDISNY IDRLKKKGIP 240 LNHILPADPL LNCSIESEEA AAEADVEQSS SPSSPLPPQE EEQQTASPKP QCTQLPTCMD 300 TSTMIVMDPI EEHELNWSFC LDSGLTPLPV LDLPLENASK LPSLFDDSGF EDNIDLIFDA 360 CCFGNDGNRC GV

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MKRSPDSSCS SSSSSSYSSS ASSYCLCSDT PPNYHLLRSQ PNSKRVRRIQ KKQDKCQINA  60
TTSSRRSSIY RGVTRHRWTG RFEAHLWDKS SWNNIQNKKG RQGAYDNEEA AAHTYDLAAL  120
KYWGPDTTLN FPIETYSKEL EEMQKMSKEE YLASLRRRSS GFSRGVSKYR GVARHHHNGR  180
WEARIGRVFG NKYLYLGTYN TQEEAAAAYD MAAIEYRGAN AVTNFDISNY IDRLKKKGIP  240
LNHILPADPL LNCSIESEEA AAEADVEQSS SPSSPLPPQE EEQQTASPKP QCTQLPTCMD  300
TSTMIVMDPI EEHELNWSFC LDSGLTPLPV LDLPLENASK LPSLFDDSGF EDNIDLIFDA  360
CCFGNDGNRC GV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-111	AP2 family protein