PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674385.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 340aa MW: 38533.1 Da PI: 6.5121

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.1	2.8e-15	33	92	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ k+ ++++lg ++ +e Aa ++ a++k++g XP_021674385.1 33 SIYRGVTRHRWTGRFEAHLWDkSSWNNiqnKKgRQVYLGAYDNEEAAAHTYDLAALKYWG 92 57*****************777799977447***********************98 PP
2	AP2	53.3	6.8e-17	135	187	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g+ XP_021674385.1 135 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYNTQEEAAAAYDMAAIEYRGA 187 89**99******99966...3.6***********************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MKRSQPNSKR VRRIQKKQDK CQINATTSSR RSSIYRGVTR HRWTGRFEAH LWDKSSWNNI 60 QNKKGRQVYL GAYDNEEAAA HTYDLAALKY WGPDTTLNFP IETYSKELEE MQKMSKEEYL 120 ASLRRRSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK YLYLGTYNTQ EEAAAAYDMA 180 AIEYRGANAV TNFDISNYID RLKKKGIPLN HILPADPLLN CSIESEEAAA EADVEQSSSP 240 SSPLPPQEEE QQTASPKPQC TQLPTCMDTS TMIVMDPIEE HELNWSFCLD SGLTPLPVLD 300 LPLENASKLP SLFDDSGFED NIDLIFDACC FGNDGNRCGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.1	1e-116	AP2 family protein