PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674875.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 242aa MW: 27571.4 Da PI: 8.7464

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674875.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	98.3	3.1e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_021674875.1 9 KRIENKINRQVTFGKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	91.2	1.9e-30	86	173	13	100
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++s +qe+ kLk+++e Lqr+qR+llGedL++L+ keL+qLe qLe+slk+iR + ++++l+q+ +lq+ke+ l e+nkaL++klee XP_021674875.1 86 ETQSNYQEYLKLKARVEVLQRSQRNLLGEDLGPLNTKELEQLELQLETSLKQIRLTMTQFMLDQLADLQNKERLLIETNKALKRKLEE 173 7899*********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MGRGRVELKR IENKINRQVT FGKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCST 60 SNMMRTLERY QKCSYGGLEA SQPGYETQSN YQEYLKLKAR VEVLQRSQRN LLGEDLGPLN 120 TKELEQLELQ LETSLKQIRL TMTQFMLDQL ADLQNKERLL IETNKALKRK LEEGSGQVPL 180 RLAWEGGGHT IPYSRLPAHS DGFFQPKGGN STLQIGYNPE GAEEDNVSHT HDLNGFIPGF 240 ML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	2e-98	MIKC_MADS family protein