PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021674876.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 240aa    MW: 27914.8 Da    PI: 9.6761
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021674876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.98.8e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+
  XP_021674876.1  9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59
                    79***********************************************96 PP
2K-box101.31.3e-33781753100
           K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     +++ +++ ++++ s++ e+akLk+++e  qr+qRh++GedL++LslkeLq++eqq++++lk+iRs+Kn+l++e+i elqkk k+lqe+n++  kk
  XP_021674876.1  78 DRQLVATGSETNGSWTLEHAKLKARMEVFQRNQRHFMGEDLDTLSLKELQSVEQQIDSALKHIRSRKNQLMYESIAELQKKSKALQEQNNQFAKK 172
                     5666677788899********************************************************************************** PP

           K-box  98 lee 100
                     ++e
  XP_021674876.1 173 VKE 175
                     986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLFEYSTD  60
SCSMERILER YERYSYADRQ LVATGSETNG SWTLEHAKLK ARMEVFQRNQ RHFMGEDLDT  120
LSLKELQSVE QQIDSALKHI RSRKNQLMYE SIAELQKKSK ALQEQNNQFA KKVKEKEKEK  180
EIAQQNQKEQ QNHIIDSSTV LPPPMQSLNI RGNRDEDETT PMQNLANAVL PSWMIPYLNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.13e-94MIKC_MADS family protein