PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674924.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WOX

Protein Properties

Length: 256aa MW: 29024.1 Da PI: 5.8584

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674924.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.8	1.3e-21	105	165	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps+++++e++++l +++e++V++WFqNrRa+ k+ XP_021674924.1 105 RQRWTPTPVQLQILERIFDQgNGTPSKQKIKEITSELsqhgQISETNVYNWFQNRRARSKR 165 89***************99************************************97 PP
2	Wus_type_Homeobox	102.1	3.8e-33	104	167	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq XP_021674924.1 104 ARQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQ 167 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MEWENNQENQ QQQQENQNQR EHRNGNNITS VHGNNGNGGM LYVKVMTDEQ LETLRKQIAV 60 YATICEQLVE MHKTLSAQQD LAGGRLGNLY CDPLMASGGH KITARQRWTP TPVQLQILER 120 IFDQGNGTPS KQKIKEITSE LSQHGQISET NVYNWFQNRR ARSKRKQLVA SSNNAESEVE 180 TEVDSPNEKK TKPEIFHSQQ NPPRADDLCF QSPEISSELH FLGVLPNQRD DHLTGKMGVP 240 GSYNLYDQAD DYGMAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	159	167	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	1e-110	WOX family protein