PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021675074.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 575aa MW: 63117.4 Da PI: 8.5489

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021675074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.7e-05	92	114	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_021675074.1 92 FVCEICNKGFQRDQNLQLHRRGH 114 89*******************88 PP
2	zf-C2H2	15.4	5.3e-05	168	190	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ XP_021675074.1 168 WKCDKCSKKYAVQSDWKAHQKTC 190 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MSNITGDGGS FSSGNTGEEE VQQLQEKQQQ QQHLQLQNHF HGSNSDATNS NGSSSQQQQQ 60 PVKKKRNLPG TPDPNAEVIA LSPTTLMATN RFVCEICNKG FQRDQNLQLH RRGHNLPWKL 120 RQRTTTEVKK RVYICPEPTC VHHNPARALG DLTGIKKHFS RKHGEKKWKC DKCSKKYAVQ 180 SDWKAHQKTC GTREYKCDCG TIFSRRDSFI THRAFCDALA EENNKVNQGL MSNMGSNLQT 240 QMPDIMSSMP LTSTNANSTS VGISDFNSFD PKNSLKSLPQ ELVPMPFKSM NMAAGGGMFS 300 SSSGTLFGSP RSISSASSSL QLSSNSSSGY NYLQDGKNGC QISGSAHMSA TALLQKAAQM 360 GATASNSINS PMMQKSFASS MAGPDQFSSI RPPSYGVVQQ HGTTLYDHFP SQPEQTSMVG 420 INAGGFNNNN QPLQKCPQEM SQFFETTIGS SGMNDMGMFS TMFMGTEQSP GFMKNMEQED 480 SGSSSLIHGR SGMERTSSGP SRFAGSSGEG GDRMTRDFMG IGGSRTGNLH DHQQQQQQRL 540 EMEAMSQHQR MPMMNHFQQQ LSLGESAMEK PIWDV

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MSNITGDGGS FSSGNTGEEE VQQLQEKQQQ QQHLQLQNHF HGSNSDATNS NGSSSQQQQQ  60
PVKKKRNLPG TPDPNAEVIA LSPTTLMATN RFVCEICNKG FQRDQNLQLH RRGHNLPWKL  120
RQRTTTEVKK RVYICPEPTC VHHNPARALG DLTGIKKHFS RKHGEKKWKC DKCSKKYAVQ  180
SDWKAHQKTC GTREYKCDCG TIFSRRDSFI THRAFCDALA EENNKVNQGL MSNMGSNLQT  240
QMPDIMSSMP LTSTNANSTS VGISDFNSFD PKNSLKSLPQ ELVPMPFKSM NMAAGGGMFS  300
SSSGTLFGSP RSISSASSSL QLSSNSSSGY NYLQDGKNGC QISGSAHMSA TALLQKAAQM  360
GATASNSINS PMMQKSFASS MAGPDQFSSI RPPSYGVVQQ HGTTLYDHFP SQPEQTSMVG  420
INAGGFNNNN QPLQKCPQEM SQFFETTIGS SGMNDMGMFS TMFMGTEQSP GFMKNMEQED  480
SGSSSLIHGR SGMERTSSGP SRFAGSSGEG GDRMTRDFMG IGGSRTGNLH DHQQQQQQRL  540
EMEAMSQHQR MPMMNHFQQQ LSLGESAMEK PIWDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	2e-99	C2H2 family protein