PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021675305.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CPP

Protein Properties

Length: 601aa MW: 64915 Da PI: 7.9254

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021675305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.1	4.2e-14	119	158	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g++C+ C+C +C N+ e+ XP_021675305.1 119 RQKQCNCKHSRCLKLYCECFASGTYCDG-CNCANCYNNVEN 158 689***********************.******9875 PP
2	TCR	50.9	3.1e-16	203	242	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e XP_021675305.1 203 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 242 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MGEGEGSEFP PKKAAQSDTQ VSSDFPAKKL ARQLDFTQGN VVLPDHPQSQ QQQQPVTLPL 60 QQKSVVVTPH GQLQQQPQMV AMAAAPPPQQ HPPARTVKPE SPKSKPRPNA ELKDGTPKRQ 120 KQCNCKHSRC LKLYCECFAS GTYCDGCNCA NCYNNVENEA ARREAVEATL ERNPNAFRPK 180 IASSPHGTRD SREENLEGLV LGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCMDCKN 240 FEGSEERQAL FHGDHANNMA YIQQAANAAI TGAIGSSGYT SPPVSKKRKG QELLFGPAAK 300 DPSFHRLGHF QQAVHIRPSA PSFSLSVNPV ARATSTANLG PSKFTYKSLL ADIIQPQDLR 360 ELCSVLVVVS GEAAKTLADQ RNATEKRVDD HAETSLASST QDSLQGQKEA DVKKITSYDC 420 SSANQADKVG PDDSSSDGAD MPKGRPMSPG TLALMCDEQD TMFMAAASPN GLTSHGCSAT 480 SQLPCGQGMA DIYAEQERIV LTKFRDCLNR LITFGEIKET KCSSLARTEL GNQEDQLING 540 TTSARAEFGK QQGPFSNGIA KHITIPTSKT AQMVTSMVAT SSNDLPKVPA LPQNGDNKPM 600 T

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MGEGEGSEFP PKKAAQSDTQ VSSDFPAKKL ARQLDFTQGN VVLPDHPQSQ QQQQPVTLPL  60
QQKSVVVTPH GQLQQQPQMV AMAAAPPPQQ HPPARTVKPE SPKSKPRPNA ELKDGTPKRQ  120
KQCNCKHSRC LKLYCECFAS GTYCDGCNCA NCYNNVENEA ARREAVEATL ERNPNAFRPK  180
IASSPHGTRD SREENLEGLV LGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCMDCKN  240
FEGSEERQAL FHGDHANNMA YIQQAANAAI TGAIGSSGYT SPPVSKKRKG QELLFGPAAK  300
DPSFHRLGHF QQAVHIRPSA PSFSLSVNPV ARATSTANLG PSKFTYKSLL ADIIQPQDLR  360
ELCSVLVVVS GEAAKTLADQ RNATEKRVDD HAETSLASST QDSLQGQKEA DVKKITSYDC  420
SSANQADKVG PDDSSSDGAD MPKGRPMSPG TLALMCDEQD TMFMAAASPN GLTSHGCSAT  480
SQLPCGQGMA DIYAEQERIV LTKFRDCLNR LITFGEIKET KCSSLARTEL GNQEDQLING  540
TTSARAEFGK QQGPFSNGIA KHITIPTSKT AQMVTSMVAT SSNDLPKVPA LPQNGDNKPM  600
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	0.0	CPP family protein