PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021675407.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 324aa MW: 37008.4 Da PI: 4.9887

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021675407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.8	1.4e-14	5	52	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l+ ++ ++G +W+ ++ g+ R++k+c++rw +yl XP_021675407.1 5 KGKWSPEEDQKLIAYISRYGIWNWNEMPKAAGLPRSGKSCRLRWMNYL 52 79****************99******99**********97 PP
2	Myb_DNA-binding	53	7.6e-17	58	102	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++++eE++ +++++k +G++ W++Ia++++ gRt++++k++w++ XP_021675407.1 58 RGNFSKEEEDTIYKLHKIMGNR-WSAIAARLP-GRTDNDIKNYWNSN 102 89******************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MALKKGKWSP EEDQKLIAYI SRYGIWNWNE MPKAAGLPRS GKSCRLRWMN YLRPNIKRGN 60 FSKEEEDTIY KLHKIMGNRW SAIAARLPGR TDNDIKNYWN SNLRKRLNNT ASAASREMKM 120 HLSEGTGPIS TVPKALVAES SKEIPDSSSS NFVSGIDKNQ ALGQNTNVGL SKVYRDFEGL 180 QGQSFSAEGL HVMEDDGATL YSFASDNDLF GYFPLLSYEN QAIDLENFDL SGELQFHSQY 240 GQLFPLEGLH IVQDNKANTY QIWHEEPVYS YKYCNDLFDY PSLWSDQYQI MTQENSMSSE 300 LSGEIIIESL WEQPCSMIEG LYTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G05100.1	1e-52	MYB family protein