PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021675414.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family NF-YC
Protein Properties Length: 190aa    MW: 21981.3 Da    PI: 7.1507
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021675414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC132.71.2e-41571592100
           NF-YC   2 lksfwekq...iekatdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 
                     l+ fw++q   i++++ fk +h+lPlarik+i+k+d +vkmisa++P+llskace+fileltlrswl++ee+kr tl+ +dia a+   d+ dfl
  XP_021675414.1  57 LERFWNQQlleIQNTSAFKsHHQLPLARIKRIMKSDRQVKMISANTPILLSKACEIFILELTLRSWLQTEECKRGTLQCCDIARAIRLNDTLDFL 151
                     789*****988899999**8899************************************************************************ PP

           NF-YC  93 vdivprde 100
                     v  vp d+
  XP_021675414.1 152 VKLVPYDH 159
                     *****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MDLNQSIEFN LSSTTSPQVH SFMPMSSVLI SNYHHPTNEG CKEARKSRFM QVQKQNLERF  60
WNQQLLEIQN TSAFKSHHQL PLARIKRIMK SDRQVKMISA NTPILLSKAC EIFILELTLR  120
SWLQTEECKR GTLQCCDIAR AIRLNDTLDF LVKLVPYDHH KKDDETGNCG EDLEPLPAIQ  180
VPFPMIDINE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.12e-38NF-YC family protein