PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021675625.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 242aa MW: 27634.5 Da PI: 8.6992

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021675625.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.2	1.7e-31	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gk+ye+ XP_021675625.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKVYEFG 58 79**********************************************95 PP
2	K-box	102.1	7.7e-34	81	170	10	99
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 e++++s++qe++kLk+++e+Lqr+qRhllGedL++Ls+keLq+Le+qLe +l R++K+++++eq+e+l+kke l e nk+L+ kle XP_021675625.1 81 IERETQSWYQEVTKLKAKYESLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKTQIMFEQMEDLRKKECHLGELNKQLKYKLE 170 46789*********************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKVYEFGSA 60 GITKTLERYQ RCCFTPQDNS IERETQSWYQ EVTKLKAKYE SLQRTQRHLL GEDLGPLSVK 120 ELQNLEKQLE GALALARQRK TQIMFEQMED LRKKECHLGE LNKQLKYKLE AEGQSLAIQD 180 LWNSGAADGN SNFALHPSQS NPLDCDPGPV LQIGYHHFVQ AEGSSVPRSM AIETNFMQGW 240 IL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	1e-115	MIKC_MADS family protein