PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021675850.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 198aa    MW: 22886.3 Da    PI: 8.462
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021675850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.26.6e-21958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    k+i+++s+  +t+skR+ g++KKA+EL vLCd++v +++fs+t kl  +s
  XP_021675850.1  9 KKIDDTSRLRITYSKRKDGLMKKANELAVLCDTDVGLLMFSPTAKLNIFS 58
                    689*******************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MGRKKLSMKK IDDTSRLRIT YSKRKDGLMK KANELAVLCD TDVGLLMFSP TAKLNIFSNK  60
RIEDIFLRYI NHPKDLQVGL TRNKEQAKLF ASQIQPWNLE NLEQAKLPDS QIQPWNLENL  120
EEAKLLNSQI QPCNLENLEV PIVMNNDNLR NEAVIGYDSE WNPSRDGNQC KENFVPVGPH  180
LSLDYLKAHL EPWKLSKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.12e-25MIKC_MADS family protein