PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021675903.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 323aa MW: 36577.3 Da PI: 7.443

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021675903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	6e-18	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++ ++ +G g+W+++++ g+ R++k+c++rw +yl XP_021675903.1 13 RGLWSPEEDEKLIKFITTHGHGSWSSVPKLAGLQRCGKSCRLRWINYL 60 788*******************************************97 PP
2	Myb_DNA-binding	52.1	1.5e-16	66	109	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E++ ++d ++ lG++ W+ Ia++++ gRt++++k++w++ XP_021675903.1 66 RGSFTAQEEKTIIDIHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MGHQCCSKQK VKRGLWSPEE DEKLIKFITT HGHGSWSSVP KLAGLQRCGK SCRLRWINYL 60 RPDLKRGSFT AQEEKTIIDI HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGL 120 DPNTHKLLSP NYKQNYNNNI ACRPSADSHY QPTFSSSVFT VSSQMKDFSM DVKKTPFTPS 180 IPSPDANYFC LHPLHISSTI TTCCVHQNSN IQAFLDCASQ SVTMGSNPIS CSTSNPSGAG 240 IIEEKCLWSG DIESTQTLRH EQMQVEQVVE IEKTNELNAG QNMDALFESS NFDFDFVECT 300 QMPEMYYSVR PIDQLTWDSQ ALQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	1e-82	MYB family protein