PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021675959.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB_related
Protein Properties Length: 629aa    MW: 71512.2 Da    PI: 10.1124
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021675959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.84.6e-07502544146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +g+WT+ E el  + ++++G++ Wkt a+ +g  + + ++k+ w+ 
   XP_021675959.1 502 KGSWTPVEYELVHKFHEKHGSD-WKTLAEALG--KHRIHVKDTWRR 544
                      799*******************.********9..566788888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 629 aa     Download sequence    
MGSKTVGRKG HEGEKMNNGV HSSKDVNACA NSSVVSTGEG LTLSNEHKKK KTKRHEANGD  60
DVELSATDTG AVGLDGDMDL SNHEIEKNRK KKKKRKSKKI NAESDVVSQK VRKRDKACDA  120
GWEIDASKEN LKEGRTGVGE NVSLKDGKKY MERNFESGVL KYRKKKHKEK KSKDKNENGR  180
NHLDENIMDH DKSARMERKQ KKQQLIVNLE AKSLKLMAET PGNFSNAIKE NGGNIDSGED  240
ENLGAHAFNA EDGRKDEKKR KKRKRDKDVS DTATMINEIN QKDVGNIMEK VQHSRKKSKK  300
REKHNVDLAA ALQEKMNGKL GNKSNPMGEN EGNEYSIENK VGGGKIEDHT VKKVKKKKKV  360
KSVVNGSEGK GSDREQRMGK GVEGTNPLEK STLKGTSKRV SFSEEVEVFP LSDDGPSSNT  420
VQKEEMVRGK RFSHEEDVMV KEAVLNYMDA HGLGEEGLQM VLNCKKYPEL KNCWKEIGAA  480
LPWRPYLSVY NRAHILFERD EKGSWTPVEY ELVHKFHEKH GSDWKTLAEA LGKHRIHVKD  540
TWRRIKVINR RRGKWSQDEY QILFDLVNMD LRMKACEEMK SSKHGMLRDN ICWTAISEKL  600
GTRATPMCCM KWHHQLTSPM VYFQMLNLT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18895NRKKKKKR
28995RKKKKKR
39099KKKKKRKSKK
490116KKKKKRKSKKINAESDVVSQKVRKRDK
59096RKKKKKR
691117KKKKKRKSKKINAESDVVSQKVRKRDK
79196KKKKRK
89199KKKKRKSKK
992118KKKKKRKSKKINAESDVVSQKVRKRDK
1093119KKKKKRKSKKINAESDVVSQKVRKRDK
11258262KKRKK
12258303KKRKKRKRDKDVSDTATMINEINQKDVGNIMEKVQHSRKKSKKREK
13258264RKKKKKR
14259304KKRKKRKRDKDVSDTATMINEINQKDVGNIMEKVQHSRKKSKKREK
15259265RKKKKKR
16260305KKRKKRKRDKDVSDTATMINEINQKDVGNIMEKVQHSRKKSKKREK
17260265RKKRKR
18260267RKKRKRDK
19261306KKRKKRKRDKDVSDTATMINEINQKDVGNIMEKVQHSRKKSKKREK
20262307KKRKKRKRDKDVSDTATMINEINQKDVGNIMEKVQHSRKKSKKREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.15e-87MYB_related family protein