PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021676353.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 178aa    MW: 20516 Da    PI: 10.5155
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021676353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF68.75.3e-221053245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                     ++++  rqvtfskRr gi+KKA+EL +LC+a++a+++fs+ gk
  XP_021676353.1 10 MVKDSNSRQVTFSKRRSGIFKKAHELATLCAAQIAIVVFSPGGK 53
                    5789999**********************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MGRRKIEMKM VKDSNSRQVT FSKRRSGIFK KAHELATLCA AQIAIVVFSP GGKPFSFGHP  60
SVEPVVERFL NDKGKKSTKV YNFCRSEARL EKLNNQLLDL QRQLQFEKKK EQLLQKAMKA  120
NEIPNLEPLD EMSVDKLLKF KKALEELREK MKARVVEMEA SSSLLLLSKN CIQENNHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.11e-34M-type_MADS family protein