PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021676354.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 205aa    MW: 23487.7 Da    PI: 9.9977
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021676354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF60.71.8e-191561147
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                    krien+  r +tfskRr gi KKA+EL +LC+aev v++fs+ gk +
  XP_021676354.1 15 KRIENEDGRLITFSKRRSGIYKKASELVTLCGAEVGVLVFSPAGKPF 61
                    79*****************************************9855 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MAAKQTKGRQ KITMKRIENE DGRLITFSKR RSGIYKKASE LVTLCGAEVG VLVFSPAGKP  60
FSFGHPSMES ISNRFLGNNL TPIDSTHPLV EAYRKLRINE LNQNCNELLS RLEAEKERGN  120
MLKQMMKGKG RRQQQQSYWW EAPVDELNFQ DLHQMYAMLE DLHSNLCRKI NGPSSSRNPL  180
FACTNHQNDP AGSFPHGFDY GRRHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-44M-type_MADS family protein