PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021676355.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 217aa    MW: 24250.6 Da    PI: 8.4836
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021676355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF53.53e-171967149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    k+ien+  r +tfskRr gi KKA+EL +L++ae a ++fs+ gk + +
  XP_021676355.1 19 KKIENEDDRLITFSKRRSGIYKKASELITLTGAELAFVVFSPAGKPFSF 67
                    68******************************************97776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MAADHQGKKT KGRQKIEMKK IENEDDRLIT FSKRRSGIYK KASELITLTG AELAFVVFSP  60
AGKPFSFAHP SVDAVADKFL GKEPEANAES TTHPLVEAHR QIRIEELNQQ HNELIRQLDA  120
VKEKGKQLKQ RLRGIERKGW WDTPIEELNV QEMIQMEAAC EDIQMNLINK LKDKTSSGAS  180
SSAAAAAVAH HQAQMINPFA PMNPNEAKPP VFPPGYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.14e-40M-type_MADS family protein