PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676394.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 718aa MW: 81928.9 Da PI: 8.5888

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.3	8.3e-09	510	551	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE el ++ ++++G++ Wkt a+ +g + + ++k+ w+ XP_021676394.1 510 RSWTAEECELVLKFHEKYGSD-WKTLAEALG--KHRIHVKDTWRR 551 68*****************.******9..566788888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 718 aa Download sequence
MGTKTVGRKG REGDKKKNEV HSSKDMTPCA NSSAVSIGDG LTLSNEHEEK NTKRHKANGY 60 DFELSATETE DVSLGGDIDL SNHEIEKNRK KKKRKSEQIN AESYVVSQTV RKRNKAGDTG 120 GEVSESKEDL KEACTGVGEK MSLQKDGKID LESNHKSGVL KDRKNKHKKK KNKDKNENGS 180 DHLDEIITDY VESPRNETKK KQQQQHHNVD LEAKSPKVMA ETPGNESNAI EENGGNIDSA 240 EDENLDAHAL YAEDGRKDEK KRKKRKREKD VRDTGVMIDE SDRKDVGNES ELDGNIMKNV 300 EPSRKESKKK KKHNVYLEAA SRERMDGKLG NQNNQMGENE GNEYSIENNA GGGKIEGHNV 360 KKVKKKKVKS VENGLEGKGS ERELRISKGV EATNPSERST PKGTSKRVSF SEQVEVFPLS 420 DGPSGKTVQK EKLVQGKRFS REEDEMVKEA VLNYISAHGL GEEGLKMVLN CKKYPELKNC 480 WKEIGAALPW RPFVSVYYRA HILFERDKKR SWTAEECELV LKFHEKYGSD WKTLAEALGK 540 HRIHVKDTWR RIKVANRKRG RWSQEEYQTL FDLVNMDLRM KAREETRSSK HGMLRDNICW 600 TAISDKLGTR TTPMCCMKWY HQLTSPMVAE GEWLDVDDYQ LVIALYDLDA CCMEDVDWDN 660 LLEHRSGDVC RKRWNQMVKH LGEHGNKSFA EQVEVLVERY CPDVLEAREA YNSKPVIR

Sequence ? help Back to Top

Protein Sequence Length: 718 aa Download sequence

MGTKTVGRKG REGDKKKNEV HSSKDMTPCA NSSAVSIGDG LTLSNEHEEK NTKRHKANGY  60
DFELSATETE DVSLGGDIDL SNHEIEKNRK KKKRKSEQIN AESYVVSQTV RKRNKAGDTG  120
GEVSESKEDL KEACTGVGEK MSLQKDGKID LESNHKSGVL KDRKNKHKKK KNKDKNENGS  180
DHLDEIITDY VESPRNETKK KQQQQHHNVD LEAKSPKVMA ETPGNESNAI EENGGNIDSA  240
EDENLDAHAL YAEDGRKDEK KRKKRKREKD VRDTGVMIDE SDRKDVGNES ELDGNIMKNV  300
EPSRKESKKK KKHNVYLEAA SRERMDGKLG NQNNQMGENE GNEYSIENNA GGGKIEGHNV  360
KKVKKKKVKS VENGLEGKGS ERELRISKGV EATNPSERST PKGTSKRVSF SEQVEVFPLS  420
DGPSGKTVQK EKLVQGKRFS REEDEMVKEA VLNYISAHGL GEEGLKMVLN CKKYPELKNC  480
WKEIGAALPW RPFVSVYYRA HILFERDKKR SWTAEECELV LKFHEKYGSD WKTLAEALGK  540
HRIHVKDTWR RIKVANRKRG RWSQEEYQTL FDLVNMDLRM KAREETRSSK HGMLRDNICW  600
TAISDKLGTR TTPMCCMKWY HQLTSPMVAE GEWLDVDDYQ LVIALYDLDA CCMEDVDWDN  660
LLEHRSGDVC RKRWNQMVKH LGEHGNKSFA EQVEVLVERY CPDVLEAREA YNSKPVIR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	95	NRKKKKRK
2	89	94	RKKKKR
3	89	95	RKKKKRK
4	90	95	KKKKRK
5	90	115	KKKKRKSEQINAESYVVSQTVRKRNK
6	91	116	KKKKRKSEQINAESYVVSQTVRKRNK
7	92	117	KKKKRKSEQINAESYVVSQTVRKRNK
8	260	264	KKRKK
9	260	266	RKKKKRK
10	261	267	RKKKKRK
11	262	267	RKKKKR
12	262	267	RKKRKR
13	262	269	RKKRKREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-138	MYB_related family protein