PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676555.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 671aa MW: 75214.2 Da PI: 10.2116

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.7	1.7e-10	10	62	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrwqkyl 48 ++W t E++ll++av+++G+ +W+++a +++ +t +c++++++++ XP_021676555.1 10 QPWGTLEELLLACAVNRHGTQSWDSVAVEVQnrtttlSSLTSQHCIDKFNDLK 62 79*****************************9999998899999999999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 671 aa Download sequence
MAREHQRIAQ PWGTLEELLL ACAVNRHGTQ SWDSVAVEVQ NRTTTLSSLT SQHCIDKFND 60 LKRRFMPSND TSASLVSMVD ELRRIRVEEL RREVQRRDVS IVSLELKVKR LEDERERSLR 120 EEADLAREKG TSPELIVGKS AHGNESGDER DNRSFNESNS TSQQKAERTT MIDQNDAVNG 180 EPDIKPKPAN TNEKNPVHTG SDPEAERDWS HNGKLREVDD DENDKIPTDK KEPEIKTSQT 240 TGGLGESNEL GESVGESKRE DKEKQNSDVQ SSASLSLKRN NRRRKLITGG GNGVGVGSSS 300 GEEPEGGDEV SPAMKRMPAV KSEPLVKLLG IIRSHRLGSV FERRLQSQES KRYKKLIKQH 360 IDLQMIQCRL DGGAYSLCLQ KFFRDLLLLF NNAITFFGKN SPENLAARDL LTIVRKEMTE 420 KLCEAKPEPV TVKPIPVQQP ISFSKPNKSC TIVVCGKGNS AKGISESATK KVDKKDREGE 480 NKTKANEKKI EGSFVRIEEK GTRKKMTKER SISCHRNSNN TKKNGEIKHQ YGGNELSSHD 540 ALEMKVERKG SSTRKRQGAA SFLKRIKQNS PSQVMENDVE DDSSEDESKD EKEKEEKGKR 600 GRNRDGITER VTRSSRAREE SGSAKRIGRP PKKQAKSTVE SGGGIRKKRG RDNGDARVEV 660 GGGRARKRSR R

Sequence ? help Back to Top

Protein Sequence Length: 671 aa Download sequence

MAREHQRIAQ PWGTLEELLL ACAVNRHGTQ SWDSVAVEVQ NRTTTLSSLT SQHCIDKFND  60
LKRRFMPSND TSASLVSMVD ELRRIRVEEL RREVQRRDVS IVSLELKVKR LEDERERSLR  120
EEADLAREKG TSPELIVGKS AHGNESGDER DNRSFNESNS TSQQKAERTT MIDQNDAVNG  180
EPDIKPKPAN TNEKNPVHTG SDPEAERDWS HNGKLREVDD DENDKIPTDK KEPEIKTSQT  240
TGGLGESNEL GESVGESKRE DKEKQNSDVQ SSASLSLKRN NRRRKLITGG GNGVGVGSSS  300
GEEPEGGDEV SPAMKRMPAV KSEPLVKLLG IIRSHRLGSV FERRLQSQES KRYKKLIKQH  360
IDLQMIQCRL DGGAYSLCLQ KFFRDLLLLF NNAITFFGKN SPENLAARDL LTIVRKEMTE  420
KLCEAKPEPV TVKPIPVQQP ISFSKPNKSC TIVVCGKGNS AKGISESATK KVDKKDREGE  480
NKTKANEKKI EGSFVRIEEK GTRKKMTKER SISCHRNSNN TKKNGEIKHQ YGGNELSSHD  540
ALEMKVERKG SSTRKRQGAA SFLKRIKQNS PSQVMENDVE DDSSEDESKD EKEKEEKGKR  600
GRNRDGITER VTRSSRAREE SGSAKRIGRP PKKQAKSTVE SGGGIRKKRG RDNGDARVEV  660
GGGRARKRSR R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	283	LKRNNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	3e-33	MYB_related family protein