PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021676589.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 146aa    MW: 15973.1 Da    PI: 7.3711
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021676589.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260149.49.2e-47131121100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca+dCv+apyfpa++p+kfa vhk+FGasnv k+l++lpe++r+da+ss+vyeA+ar+rdPvyG+vg i++lqqq+++l+++la
  XP_021676589.1  13 PCAACKLLRRRCAHDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEHQRSDAVSSIVYEANARVRDPVYGCVGAISSLQQQIDSLQTQLA 107
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                      +++e
  XP_021676589.1 108 IAQAE 112
                     99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MKESGRKQGA LSPCAACKLL RRRCAHDCVF APYFPADEPQ KFASVHKVFG ASNVNKMLQE  60
LPEHQRSDAV SSIVYEANAR VRDPVYGCVG AISSLQQQID SLQTQLAIAQ AEVVHMRMQQ  120
YGSSSNPGTV DMVVDQANVG ESLWSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31320.18e-65LBD family protein