PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676643.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 304aa MW: 34284.9 Da PI: 9.2862

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676643.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3.1e-17	17	62	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v q+G+++W+ Ia+++ gR++k+c++rw++ XP_021676643.1 17 RGHWRPAEDEKLQQLVDQYGPRNWNFIAEHLH-GRSGKSCRLRWYNQ 62 899***************************.**********96 PP
2	Myb_DNA-binding	45.3	2e-14	69	113	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++T+eE+ +l++a++ G+ W++Ia ++ gRt++ +k+ ++ + XP_021676643.1 69 KKPFTEEEERRLLQAHQIQGNQ-WALIAGLFP-GRTDNAVKNQYHVV 113 689***************99.*****.*********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MENGRGSSTD IGKSCHRGHW RPAEDEKLQQ LVDQYGPRNW NFIAEHLHGR SGKSCRLRWY 60 NQLDPNINKK PFTEEEERRL LQAHQIQGNQ WALIAGLFPG RTDNAVKNQY HVVMARRKRE 120 RLSSVYGKRS FHVHPTETNK ITSFVSNCES CYWPHLXHSK LGFQASSNFD NFPICSSSSS 180 SCNLSASTIT NELLSFNFFD EKRKDYINSS SSSSYTKEGL LHSFNGSTYI GYQSLCGSPQ 240 ISNSKKAASN DNPSALVSYG EGGYASKSPT LQKLPTITYQ QEQGDGALKR KDVSFIDFLR 300 VGIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33450.1	2e-67	MYB family protein