PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021676729.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GATA
Protein Properties Length: 264aa    MW: 29414.2 Da    PI: 8.0097
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021676729.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.21.3e-19185219135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+ kTp+WR gp g+ktLCnaCG++y++ +l
  XP_021676729.1 185 CQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRL 219
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MESLDPAACF MDDLLDFASD IGEKDDDEDP SKPRNAFPSL NPSPNGLAVV PPPFDVFDHP  60
DDSTRPSPEF AEEELEWLSN KDAFPALETF VDVLSEHPGS LPKQRSPVSV LENSTTSSTS  120
NSGNSGANGS VIMNYCRSPH VPVKARSKHQ RRRRRDLQAQ QCWWSLENLK KLKPAVTSST  180
MGRKCQHCGA EKTPQWRAGP LGPKTLCNAC GVRYKSGRLV PEYRPASSPT FCSEWHSNSH  240
RKVMEMRKQK QIMGLMVVKT MEKG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151173RRRRRDLQAQQCWWSLENLKKLK
2152174RRRRRDLQAQQCWWSLENLKKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.15e-55GATA family protein