PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676931.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 506aa MW: 55875.2 Da PI: 5.3009

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676931.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.9e-13	359	405	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq XP_021676931.1 359 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 405 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MGEKFWVNEE KAFVESVLGI EACEFLIASA SSNVLADLVS PPNNLGLQQG LCQLVDGSNW 60 NYAIFWYASS LKSGGSILIW GDGVCRNPKG GGPGEGNSIG DSKFEAVEKR EEVKKIVLQK 120 LHACFNVLDG DNYAANLDRV SDLEMFYLIS MYFTFLCDSS YAPAESYKSG RSIWASDMIS 180 CLEQYQLRSV LARSAGLQTV VFLPVKSGVV ELGSIKSIPE EHNLVERAKT IFGASNAVQA 240 RACPKIFGHE LSLGGTKSRS ISINFSPKVE DDLIFASESY AEAIGTNPVY GSTSNGCAGD 300 PNEAKLFPQL NQMNLSGFNA ETMVTGLEQP KDDLSPQLDE RKPRKRGRKP ANGREEPLNH 360 VEAERQRREK LNQRFYALRA VVPNISKMDK ASLLGDAITY ITDLQMKIRV LETEKEVTNN 420 RRKQPSLPEI DFQARQDDAV VRLSCPLDAH PVSSILETFQ EHQITAQECN VSATTENDKI 480 IHTFSIRTQS GVAEQLKEKL ETALSK

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MGEKFWVNEE KAFVESVLGI EACEFLIASA SSNVLADLVS PPNNLGLQQG LCQLVDGSNW  60
NYAIFWYASS LKSGGSILIW GDGVCRNPKG GGPGEGNSIG DSKFEAVEKR EEVKKIVLQK  120
LHACFNVLDG DNYAANLDRV SDLEMFYLIS MYFTFLCDSS YAPAESYKSG RSIWASDMIS  180
CLEQYQLRSV LARSAGLQTV VFLPVKSGVV ELGSIKSIPE EHNLVERAKT IFGASNAVQA  240
RACPKIFGHE LSLGGTKSRS ISINFSPKVE DDLIFASESY AEAIGTNPVY GSTSNGCAGD  300
PNEAKLFPQL NQMNLSGFNA ETMVTGLEQP KDDLSPQLDE RKPRKRGRKP ANGREEPLNH  360
VEAERQRREK LNQRFYALRA VVPNISKMDK ASLLGDAITY ITDLQMKIRV LETEKEVTNN  420
RRKQPSLPEI DFQARQDDAV VRLSCPLDAH PVSSILETFQ EHQITAQECN VSATTENDKI  480
IHTFSIRTQS GVAEQLKEKL ETALSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	341	349	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-178	bHLH family protein