PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021677378.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 177aa    MW: 20154.2 Da    PI: 5.0267
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021677378.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.11.2e-065885127
                    --S---SGGGGTS.--TTTTT-SS-SSS CS
         zf-CCCH  1 yktelCrffartG.tCkyGdrCkFaHgp 27
                    ykt+lC++f+r    C +G +C++aHg+
  XP_021677378.1 58 YKTSLCSYFRRRSgSCCHGIKCRYAHGE 85
                    9********99777************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MSPNDSPIQN HEHEQPQLSN PESTGSNGGD NRGEKRKREE TAQSEMEEKV DPSLNPYYKT  60
SLCSYFRRRS GSCCHGIKCR YAHGEDELRP RPDNTWDPTS ERAKKAMKLE DNGDKCEERK  120
AEEVMMTEWL VDVGEGGEGE CLDPGLSKCL VHLPRKWTSY NLRNFLNEQE TAVCTGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28450.22e-36C3H family protein