PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021677864.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 218aa    MW: 23750.2 Da    PI: 5.8164
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021677864.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260927.2e-292101195
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C++lr++C++dC+l++++     p++q++++ +v+k+FG++ ++++++++p ++r+ +++sl++eA  r+ +Pv+Gavg++++++++++q+
  XP_021677864.1   2 SCNGCRILRKGCSEDCMLRQCLqwiinPQAQANATVFVAKFFGRAGLMSFISSVPLNQRPSLFQSLLFEAVGRTVNPVSGAVGLLWTGNWHVCQT 96 
                     6*********************************************************************************************9 PP

          DUF260  91 kaela 95 
                     ++ ++
  XP_021677864.1  97 AVMTV 101
                     87665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MSCNGCRILR KGCSEDCMLR QCLQWIINPQ AQANATVFVA KFFGRAGLMS FISSVPLNQR  60
PSLFQSLLFE AVGRTVNPVS GAVGLLWTGN WHVCQTAVMT VLRGGALEPI LEFDGRMLGP  120
DLDNFSECVN FTPINVSSGS KTTRTTTLKR KRSDDDEGIC GLTNLDLCLM HPAEEKQRSV  180
TPSEEESEMT TLESGGYASA GTNCSLQGGE RKLLSLFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.11e-61LBD family protein