PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021677900.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family YABBY
Protein Properties Length: 212aa    MW: 23553.9 Da    PI: 8.152
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021677900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY235.41.3e-72111762170
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkve.eenlksnvekeesas 93 
                     d+ s s+q+Cyv+CnfC+t+lavsvP +slfk+vtvrCGhCt+ll+vn++      a + hl++++ ++  +lee +++  +n+  n+ + +++ 
  XP_021677900.1  11 DHLSPSDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCTNLLTVNMRSLLLPSANQLHLGHAFFNPqnILEEIRSAaPQNMLINQPNPNEPF 105
                     78899*****************************************8887777777777788888776545566655431445444444444443 PP

           YABBY  94 tsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                       v      +   ee+p++p v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+i fgl
  XP_021677900.1 106 IPV------RGGMEELPKQPAVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIQFGL 176
                     333......456799************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MSSSSAAFSP DHLSPSDQLC YVHCNFCDTV LAVSVPCSSL FKTVTVRCGH CTNLLTVNMR  60
SLLLPSANQL HLGHAFFNPQ NILEEIRSAA PQNMLINQPN PNEPFIPVRG GMEELPKQPA  120
VNRPPEKRQR VPSAYNRFIK DEIQRIKAGN PDISHREAFS AAAKNWAHFP HIQFGLMPDQ  180
PVKKTNVRQQ EGDEVLMKDG LFAPSNLGVA PY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.14e-97YABBY family protein