PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678020.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

E2F/DP

Protein Properties

Length: 496aa MW: 55382.9 Da PI: 4.7862

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.4	2.1e-27	143	208	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_021678020.1 143 RYDSSLGLLTKKFINLIKHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 208 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MLNSQPPNPS TRQLQQNTMQ NPLKRQLPFS SMKPPFSAPG DYHRFSSEPR RVADHEVEAI 60 VVIPPPTKRK SDAADHEAES SEWNTSAGVT EVFNSPLQTP VSGKSGKAPK TSRLAKSSKS 120 GAQSAASNLG SPGNNLTPTG PCRYDSSLGL LTKKFINLIK HAEDGILDLN KAADTLEVQK 180 RRIYDITNVL EGIGLIEKKL KNRIQWKGLD VSRPGEADEN VASLQAEVEN LNIEEHRLDE 240 QIRLCNFSLC TCNSHMLLGS NFWFVLIFQI YCRVVQERLR DLSEDENNQK WLFVTEEDIK 300 SLPCFQNETL IAIKAPHGTT LEVPDPDEQA VDYPQRRYRI VFRSTMGPID VYLVSQFEEK 360 FEEIHGVEPP ASYPSTSGFN ENQVNSMVPG ESRGKEIEIQ GQDAYRMCSD LNTSQDFVSG 420 IMKIVPSDVD SDADYWLLSD AGVSITDIWR TEPGVEWNEF GTLHDDYRMG NVSTPRPQTP 480 PSNPTEVPSN VNNTAG

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MLNSQPPNPS TRQLQQNTMQ NPLKRQLPFS SMKPPFSAPG DYHRFSSEPR RVADHEVEAI  60
VVIPPPTKRK SDAADHEAES SEWNTSAGVT EVFNSPLQTP VSGKSGKAPK TSRLAKSSKS  120
GAQSAASNLG SPGNNLTPTG PCRYDSSLGL LTKKFINLIK HAEDGILDLN KAADTLEVQK  180
RRIYDITNVL EGIGLIEKKL KNRIQWKGLD VSRPGEADEN VASLQAEVEN LNIEEHRLDE  240
QIRLCNFSLC TCNSHMLLGS NFWFVLIFQI YCRVVQERLR DLSEDENNQK WLFVTEEDIK  300
SLPCFQNETL IAIKAPHGTT LEVPDPDEQA VDYPQRRYRI VFRSTMGPID VYLVSQFEEK  360
FEEIHGVEPP ASYPSTSGFN ENQVNSMVPG ESRGKEIEIQ GQDAYRMCSD LNTSQDFVSG  420
IMKIVPSDVD SDADYWLLSD AGVSITDIWR TEPGVEWNEF GTLHDDYRMG NVSTPRPQTP  480
PSNPTEVPSN VNNTAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-159	E2F/DP family protein