PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678024.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

E2F/DP

Protein Properties

Length: 466aa MW: 51826.6 Da PI: 4.6948

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678024.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.5	1.9e-27	143	208	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_021678024.1 143 RYDSSLGLLTKKFINLIKHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 208 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MLNSQPPNPS TRQLQQNTMQ NPLKRQLPFS SMKPPFSAPG DYHRFSSEPR RVADHEVEAI 60 VVIPPPTKRK SDAADHEAES SEWNTSAGVT EVFNSPLQTP VSGKSGKAPK TSRLAKSSKS 120 GAQSAASNLG SPGNNLTPTG PCRYDSSLGL LTKKFINLIK HAEDGILDLN KAADTLEVQK 180 RRIYDITNVL EGIGLIEKKL KNRIQWKGLD VSRPGEADEN VASLQAEVEN LNIEEHRLDE 240 QIRVVQERLR DLSEDENNQK WLFVTEEDIK SLPCFQNETL IAIKAPHGTT LEVPDPDEQA 300 VDYPQRRYRI VFRSTMGPID VYLVSQFEEK FEEIHGVEPP ASYPSTSGFN ENQVNSMVPG 360 ESRGKEIEIQ GQDAYRMCSD LNTSQDFVSG IMKIVPSDVD SDADYWLLSD AGVSITDIWR 420 TEPGVEWNEF GTLHDDYRMG NVSTPRPQTP PSNPTEVPSN VNNTAG

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MLNSQPPNPS TRQLQQNTMQ NPLKRQLPFS SMKPPFSAPG DYHRFSSEPR RVADHEVEAI  60
VVIPPPTKRK SDAADHEAES SEWNTSAGVT EVFNSPLQTP VSGKSGKAPK TSRLAKSSKS  120
GAQSAASNLG SPGNNLTPTG PCRYDSSLGL LTKKFINLIK HAEDGILDLN KAADTLEVQK  180
RRIYDITNVL EGIGLIEKKL KNRIQWKGLD VSRPGEADEN VASLQAEVEN LNIEEHRLDE  240
QIRVVQERLR DLSEDENNQK WLFVTEEDIK SLPCFQNETL IAIKAPHGTT LEVPDPDEQA  300
VDYPQRRYRI VFRSTMGPID VYLVSQFEEK FEEIHGVEPP ASYPSTSGFN ENQVNSMVPG  360
ESRGKEIEIQ GQDAYRMCSD LNTSQDFVSG IMKIVPSDVD SDADYWLLSD AGVSITDIWR  420
TEPGVEWNEF GTLHDDYRMG NVSTPRPQTP PSNPTEVPSN VNNTAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-166	E2F/DP family protein