PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678134.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WOX

Protein Properties

Length: 344aa MW: 39298 Da PI: 8.9608

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678134.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	70.1	2.7e-22	86	145	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql +Lee++++ +r+psae+++++A++l +++ ++V++WFqN++a+e++ XP_021678134.1 86 SRWSPTPEQLLALEEMYRRgTRTPSAEQIQQIAAQLrrfgKIEGKNVFYWFQNHKARERQ 145 7***************99************************************97 PP
2	Wus_type_Homeobox	112.4	2.3e-36	85	147	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ+ Lee+y++G+rtP++e+iq+i+a+L+++Gkie+kNVfyWFQN+kaRerqk+ XP_021678134.1 85 SSRWSPTPEQLLALEEMYRRGTRTPSAEQIQQIAAQLRRFGKIEGKNVFYWFQNHKARERQKR 147 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MMNGGDKNEL NMNDSVYVAE FLPIISPKHK SKSTSHITTT LPYSSCTHRS ATLLGSDAHL 60 LGSGNNASEQ NRREFMNEQP LMGMSSRWSP TPEQLLALEE MYRRGTRTPS AEQIQQIAAQ 120 LRRFGKIEGK NVFYWFQNHK ARERQKRRRA VETRCRVQKH DTTGSQDLEA SAVAELRRTV 180 YEFEQKKTLV PPSSCSENTE GAVSMVRVGT TESTTPYGWP QFEERESHQN KSCSLEKNAT 240 WHAMDLYPSY PIQLINNMTT RSSRFLNSRR RSSWFRPSRR TENETNLDDE NKIGGVETLD 300 LFPLCSEDCN GVNGSKNDTK VPITAINTKL ISPNQYFEFL PLKN

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MMNGGDKNEL NMNDSVYVAE FLPIISPKHK SKSTSHITTT LPYSSCTHRS ATLLGSDAHL  60
LGSGNNASEQ NRREFMNEQP LMGMSSRWSP TPEQLLALEE MYRRGTRTPS AEQIQQIAAQ  120
LRRFGKIEGK NVFYWFQNHK ARERQKRRRA VETRCRVQKH DTTGSQDLEA SAVAELRRTV  180
YEFEQKKTLV PPSSCSENTE GAVSMVRVGT TESTTPYGWP QFEERESHQN KSCSLEKNAT  240
WHAMDLYPSY PIQLINNMTT RSSRFLNSRR RSSWFRPSRR TENETNLDDE NKIGGVETLD  300
LFPLCSEDCN GVNGSKNDTK VPITAINTKL ISPNQYFEFL PLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	3e-38	WOX family protein