PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678234.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 288aa MW: 31945.8 Da PI: 6.1261

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678234.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.7	2.3e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+d+ +++G+g +W + +r+ g++R++k+c++rw++yl XP_021678234.1 14 RGPWSPEEDATLKDYLQKHGTGgNWISLPRKAGLTRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	42.7	1.3e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ + + +G++ W+ Ia+ ++ gRt++++k++w++ XP_021678234.1 69 GGFTEEEDNIICTLYNSMGSR-WSVIASQLP-GRTDNDVKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDATLKDYLQ KHGTGGNWIS LPRKAGLTRC GKSCRLRWLN 60 YLRPDIKHGG FTEEEDNIIC TLYNSMGSRW SVIASQLPGR TDNDVKNYWN TKLRKKMLEG 120 KIDVKRSSKI SNISDITINN SSDPMVQFSV STGEAETYNP GNSSPCFSAY SSTLTPLMEM 180 GFQQYCDLQL QGLILDQSQF PLSTFTEVPN LGTYGCNSYS VSSSHQEASS LVPLDNNHSI 240 SSVNGSLVKE GGILLQDYGF EFPCELLNND LIFQGKYSTE VAPFLGNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	2e-73	MYB family protein