PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021678368.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 710aa    MW: 77877.4 Da    PI: 6.7596
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021678368.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.94.7e-203085156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++ +++t +q++ Le++F+++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  XP_021678368.1 30 KKRYHRHTGNQIQKLEAMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 85
                    678899***********************************************998 PP
2START185.92.2e-582264472206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.......dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                     +a +a++el+++ + +ep+W ks+    + +  d++ + f+++ v        ++ea+r+sg+v+m++  lv  ++d + +W e ++     a+t
  XP_021678368.1 226 IAASAMDELLRLLQTDEPLWIKSPtdgrDVLHLDTYQTLFPRA-VsrlknpnVRIEASRDSGFVIMNSLALVDMVMDAN-KWVELFPtivsVAKT 318
                     67899*******************8886556666665555554.459999999**************************.******99999**** PP

                     EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwveh 169
                     levissg      g lqlm+ elq+lsplvp R+f+++Ry++q ++g w+iv vS d +q+ ++     R+++lpSg++i++++ng+skvtwveh
  XP_021678368.1 319 LEVISSGmmgshsGSLQLMYEELQVLSPLVPtREFYILRYCQQIEQGLWAIVNVSYDIPQFASQ----CRSHRLPSGCMIQDMPNGYSKVTWVEH 409
                     *************************************************************987....*************************** PP

                     EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 170 vdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     v+ +++ p h l+r lv+sg+a+ga +w+atlqr+ce+
  XP_021678368.1 410 VEIEDKAPtHRLYRDLVHSGMAFGAERWLATLQRLCER 447
                     ************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 710 aa     Download sequence    
MEYGSGGGSG GGGGSGSGGD HDPSDPHRRK KRYHRHTGNQ IQKLEAMFKE CPHPDEKQRL  60
QLSRELGLAP RQIKFWFQNR RTQMKAQHER ADNCALRAEN DKIRCENIAI REALRNVICP  120
SCGGPPVTED SYFDEHKLRM ENAQLKEELD RVSSIAAKYI GRPISHLPPV QPIHISSLDL  180
SMGSFGGQGN GAPSLDLDLD LIPSTSNLPF HPLGISDMDK SLMTDIAASA MDELLRLLQT  240
DEPLWIKSPT DGRDVLHLDT YQTLFPRAVS RLKNPNVRIE ASRDSGFVIM NSLALVDMVM  300
DANKWVELFP TIVSVAKTLE VISSGMMGSH SGSLQLMYEE LQVLSPLVPT REFYILRYCQ  360
QIEQGLWAIV NVSYDIPQFA SQCRSHRLPS GCMIQDMPNG YSKVTWVEHV EIEDKAPTHR  420
LYRDLVHSGM AFGAERWLAT LQRLCERFAC LMVSGNSTRD LGGVIPSPDG KRSMMKLAQR  480
MVNSFCASIS TSNSHRWTTV SGMNEVGVRV HKSTDPGQPN GVVLNAATTF WLPVSPQNVF  540
NFFKDERTRA QWDVLSSGNA VQEVAHIANG SHPGNCISVL RAFNSGQNNM LILQESCIDA  600
SGSLVVYCPV DLPAVNIAMS GEDPAYIPLL PSGFTISPDG HPDHGDGASS SSNTHGSIGR  660
SSGSLITVSF QILVSSLPSA KLNLESVTTV NNLISTTVQQ IKAAMNCPSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein