PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021678400.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 288aa    MW: 33104.7 Da    PI: 9.7198
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021678400.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.92e-3171120150
                     S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 
                     krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+
  XP_021678400.1  71 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 120
                     79***********************************************8 PP
2K-box107.51.5e-351392354100
           K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     s+  s++ea+++ +qqe++kL+++i+++q+ +Rh+lGe L++L++keL++Le +Lek+++++RskKne+l++++e++qk+e elq++n++Lr+k+
  XP_021678400.1 139 SNPASASEANTQFYQQESSKLRRQIREIQNLNRHILGEALSTLTFKELKSLEGRLEKGISRVRSKKNEMLYAEVEYMQKREIELQNDNMYLRAKI 233
                     3444599***************************************************************************************9 PP

           K-box  99 ee 100
                     +e
  XP_021678400.1 234 AE 235
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MDCSRKPMNY LSSVMLKLLS LSFLVEAVST ISFFSIPSLF LYQLATTEFP NQEPDQGPSL  60
RKTGRGKIEI KRIENTTNRQ VTFCKRRNGL LKKAYELSVL CDAEVALIVF SSRGRLYEYA  120
NNSVRATIDR YKKASADSSN PASASEANTQ FYQQESSKLR RQIREIQNLN RHILGEALST  180
LTFKELKSLE GRLEKGISRV RSKKNEMLYA EVEYMQKREI ELQNDNMYLR AKIAENERAQ  240
QQQTNLMPSG SVYESVPSQA YDRNFIPVNL LEPNHHYSRP DHTALQLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42830.11e-116MIKC_MADS family protein