PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678987.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 376aa MW: 41501.1 Da PI: 7.4794

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678987.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.7e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl XP_021678987.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWSNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.9	8.3e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_021678987.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MGRSPCCEKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWSNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG 120 IDPVTHKPKN DALLSSDGQS KNTANLSHMA QWESARLEAE ARLVRESKLR SHSFQHQLSP 180 TGYVSRSGSG SASASTSAQP QRSLDAPKAW NDGWSKLCTE ENAPPQIMNS SGTGGQNSIP 240 MIELVGTSGS SETGIIKEEG EHNWKTLGNS NHHLSENSVS FTSGLHHSDL TISMEGPWTP 300 ESLRLNSGHL QIGNVMEEGF TTLLLSDSGD RNLMDSGKDS DHNSGGSGGD YYEDNKNYWN 360 SILNLVNSSP TDSPMF

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MGRSPCCEKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWSNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG  120
IDPVTHKPKN DALLSSDGQS KNTANLSHMA QWESARLEAE ARLVRESKLR SHSFQHQLSP  180
TGYVSRSGSG SASASTSAQP QRSLDAPKAW NDGWSKLCTE ENAPPQIMNS SGTGGQNSIP  240
MIELVGTSGS SETGIIKEEG EHNWKTLGNS NHHLSENSVS FTSGLHHSDL TISMEGPWTP  300
ESLRLNSGHL QIGNVMEEGF TTLLLSDSGD RNLMDSGKDS DHNSGGSGGD YYEDNKNYWN  360
SILNLVNSSP TDSPMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.2	1e-124	MYB family protein