PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679009.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 469aa MW: 50392.2 Da PI: 6.9816

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.8e-05	136	156	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cgk F + s+L rH+r H XP_021679009.1 136 CCLCGKIFLSTSSLFRHMRYH 156 9******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MDDHELQNQP PMEDPASQTF KLCIKIKIPN NITSSTTEPG GEEGAGGGEG GSSSGSIQAG 60 QPGYRVCEFC GKKFSSGKAW GGHKRHHLKI MKNNSERTQE EASNIKMKKH KHGGSERCNT 120 VKAGDVTIDS SGKPICCLCG KIFLSTSSLF RHMRYHPDRD LKGIQPPPAA PGSPKDQIDP 180 AAEMGSQSSI DLLCSLSGTW HKKGKRGICI SDSIPEAAYG LLTLSRDIGL ATPLAYGHGH 240 GSETSGLATR SLGKTIRSEI GSGSGSGSDH RSKKDEYIMN YSEEICGLVN KKKKRKMSYI 300 SKMKNSETEH REFKCSSCGK SFPTFQPLGG HRSSCPCKNK SNEHVRESAL IDDDAFASQE 360 IPASETDEET GEIGDDEPDP VASTETSFHC DICSKTFPTG QALGGHKRCH WKAPAKPLSN 420 KVVSGEASNN VASSEASPGE AEATKAGEPM LGIDLNKPYL IQEEEEDAF

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MDDHELQNQP PMEDPASQTF KLCIKIKIPN NITSSTTEPG GEEGAGGGEG GSSSGSIQAG  60
QPGYRVCEFC GKKFSSGKAW GGHKRHHLKI MKNNSERTQE EASNIKMKKH KHGGSERCNT  120
VKAGDVTIDS SGKPICCLCG KIFLSTSSLF RHMRYHPDRD LKGIQPPPAA PGSPKDQIDP  180
AAEMGSQSSI DLLCSLSGTW HKKGKRGICI SDSIPEAAYG LLTLSRDIGL ATPLAYGHGH  240
GSETSGLATR SLGKTIRSEI GSGSGSGSDH RSKKDEYIMN YSEEICGLVN KKKKRKMSYI  300
SKMKNSETEH REFKCSSCGK SFPTFQPLGG HRSSCPCKNK SNEHVRESAL IDDDAFASQE  360
IPASETDEET GEIGDDEPDP VASTETSFHC DICSKTFPTG QALGGHKRCH WKAPAKPLSN  420
KVVSGEASNN VASSEASPGE AEATKAGEPM LGIDLNKPYL IQEEEEDAF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	291	296	KKKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26940.1	2e-16	C2H2 family protein