PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679221.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 311aa MW: 35228.7 Da PI: 4.3642

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.6	5.2e-19	84	137	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q++ Le+ Fe ++++ e++ +LAk lgL+ rqV +WFqNrRa++k XP_021679221.1 84 KKRRLSVDQVRFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 137 566899***********************************************9 PP
2	HD-ZIP_I/II	129.3	1.6e-41	83	174	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrls +qv++LE+sFe e+kLeperK +la++Lglqprqva+WFqnrRAR+ktkqlEkdyeaL+++y+ lk++ ++L ke+++L++e++ XP_021679221.1 83 EKKRRLSVDQVRFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYEALQTSYNGLKADYDTLLKEKDKLKAEVN 174 69**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MASVGGGGSN FSVSLQSQRG PSTSPPLDAF FLTGSSPSFL GSRSMVSFED VHQVNGSTRP 60 FFRSFDHEEN GDDELDEYFY QPEKKRRLSV DQVRFLEKSF EVENKLEPER KIQLAKDLGL 120 QPRQVAIWFQ NRRARWKTKQ LEKDYEALQT SYNGLKADYD TLLKEKDKLK AEVNLLTDKL 180 LLREDKGNLE LSDKETLSQE PQKKPIGDST SEGEVSKVSI VACKQEDISS AKSDIFDSDS 240 PHYTDGVHSS LLEAGDSSYV FEPDQSDLSQ DEEDNLSESL LPPYVFPKLE DGDYSDPPAS 300 FEDHAFWCWS Y

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	140	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	4e-50	HD-ZIP family protein