PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021679463.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 215aa    MW: 23499.8 Da    PI: 6.3286
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021679463.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260136.11.3e-42591581100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe +r da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+a+la
  XP_021679463.1  59 PCAACKILRRRCADKCVLAPYFPPTEPYKFTIAHRVFGASNIIKFLQELPEYQRADAVSSMVYEANARIRDPVYGCAGAICQLQRQVNELQAQLA 153
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_021679463.1 154 KAQAE 158
                     99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MGNLDKAIAA ISPVAVASPF SYSPCSSPSP SSQSSPGLDP SLSQSSPTPA PPPSVVLSPC  60
AACKILRRRC ADKCVLAPYF PPTEPYKFTI AHRVFGASNI IKFLQELPEY QRADAVSSMV  120
YEANARIRDP VYGCAGAICQ LQRQVNELQA QLAKAQAEVA NMQCQQANLV ALICMEMTQS  180
HHHHQEPILQ QQQYIDTSCF LDETNFGTSW EPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.12e-61LBD family protein