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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_021679490.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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| Family | ERF | ||||||||
| Protein Properties | Length: 343aa MW: 38571.1 Da PI: 5.0495 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 56 | 1e-17 | 48 | 96 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr+++ +gr++AeIrdp++ + r++lg+f+ta+eAa a+++a+++++g
XP_021679490.1 48 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 96
56******.**********965...5************************987 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 343 aa Download sequence |
MSTSQTLDKP LYEPVKIHGG YAFIQRNTSP PQTGERRGRR KQTEPGRFLG VRRRPWGRYA 60 AEIRDPTTKE RHWLGTFDTA QEAALAYDRA ALSMKGTQAR TNFIYTDHGT FHSLFTPFDD 120 VQLQPFFQPS QFFTGIPQCN KQQLPTNQNN TPPKHETCQN ESPNQSSGET TESVYDNSFF 180 FSRDDSNNSG YLGCIVPDNC LRPPSNPTST NSKTSKSKAP SDHHQNFSST ITTTSIEHQS 240 AQCNSNAFPP DTATRSYPWF DELNSGFWGD DEKPWEFNSD ELSAMINNDP LTAEDVCMET 300 FFPSANNIPS YESVPQATSS VSSFTPSYPP YGDIVEFGYS SLF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G18560.1 | 9e-50 | ERF family protein | ||||




