PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679550.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

E2F/DP

Protein Properties

Length: 373aa MW: 42483.9 Da PI: 9.5222

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679550.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	67.9	1.3e-21	19	84	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rkeksL++l+++fl+l+ + + + l+++a +L v +rRRiYD++N+Le+++++++k+kn++ wkg XP_021679550.1 19 RKEKSLGVLCTNFLRLYDSGGVDSIGLDDAAARL---GV--ERRRIYDVVNILESVGVVARKQKNRYLWKG 84 79**************9999********.....****************************98 PP
2	E2F_TDP	76	3.8e-24	145	224	2	71
E2F_TDP 2 keksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 +eksL+lltq+f+kl+ +s+ +++tl+++a L+ + +++k+RR+YDi+NV++++nliek ++k+++rw g XP_021679550.1 145 REKSLWLLTQNFVKLFLCSDVDMITLDNAAALLLGDghnstAMRTKVRRLYDIANVFSSMNLIEKthhpdSRKPAFRWLG 224 79*************************************************************9999999****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MSSFVSRESD PNGRQFYCRK EKSLGVLCTN FLRLYDSGGV DSIGLDDAAA RLGVERRRIY 60 DVVNILESVG VVARKQKNRY LWKGFEAIPR ALEGLKEEGF RKNFSAFVSC NSAKVTNENE 120 NEGSSSSKTE GQDNSSVTSK PENKREKSLW LLTQNFVKLF LCSDVDMITL DNAAALLLGD 180 GHNSTAMRTK VRRLYDIANV FSSMNLIEKT HHPDSRKPAF RWLGWRGNNG PVTSLDLKQP 240 NKRIFGTDIS NYNMKRNKGD SSIDWNSNQK ENVPVIIKCK DLENDCNENK PDQHTKHSSK 300 CVEFGPFTPV GVQRVSDSKN KIVSRIQDLE RLAFTYHPQY NNQVLSDLFG HYVEAWKSWY 360 VEVAMKEKTQ KRS

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MSSFVSRESD PNGRQFYCRK EKSLGVLCTN FLRLYDSGGV DSIGLDDAAA RLGVERRRIY  60
DVVNILESVG VVARKQKNRY LWKGFEAIPR ALEGLKEEGF RKNFSAFVSC NSAKVTNENE  120
NEGSSSSKTE GQDNSSVTSK PENKREKSLW LLTQNFVKLF LCSDVDMITL DNAAALLLGD  180
GHNSTAMRTK VRRLYDIANV FSSMNLIEKT HHPDSRKPAF RWLGWRGNNG PVTSLDLKQP  240
NKRIFGTDIS NYNMKRNKGD SSIDWNSNQK ENVPVIIKCK DLENDCNENK PDQHTKHSSK  300
CVEFGPFTPV GVQRVSDSKN KIVSRIQDLE RLAFTYHPQY NNQVLSDLFG HYVEAWKSWY  360
VEVAMKEKTQ KRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	56	77	RRRIYDVVNILESVGVVARKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01330.1	1e-117	E2F/DP family protein