PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679570.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 211aa MW: 24471.8 Da PI: 7.6182

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.8	1e-19	56	110	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k+++++++q++ Le F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k+ XP_021679570.1 56 KKRKLSADQVNLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKN 110 56689************************************************95 PP
2	HD-ZIP_I/II	120.6	8.3e-39	56	147	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkr+ls++qv+lLE++F +e+kLe+erK +la+eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk+a+++++ e+++Le+ev +L+e+l+e XP_021679570.1 56 KKRKLSADQVNLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYTKLKTAHENIVVEKCHLESEVLKLKEKLSE 147 9***************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MTTAMNDNKV DQDHLVLLSQ LYPGVYTQMV PQQGEPKPRR RRKKNKGGEN GVTAAKKRKL 60 SADQVNLLEM NFGNEHKLES ERKDRLASEL GLDPRQVAVW FQNRRARWKN KKLEEEYTKL 120 KTAHENIVVE KCHLESEVLK LKEKLSEAEK EIQRLTERVD GVSSNSCSPT LSMEAMDAPF 180 LGEFGMEGYG DIFYMPETNY IHGMEWFNQY M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	39	58	RRRRKKNKGGENGVTAAKKR
2	39	59	RRRRKKNKGGENGVTAAKKRK
3	40	59	RRRRKKNKGGENGVTAAKKR
4	40	60	RRRRKKNKGGENGVTAAKKRK
5	41	61	RRRRKKNKGGENGVTAAKKRK
6	42	62	RRRRKKNKGGENGVTAAKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18550.1	5e-53	HD-ZIP family protein