PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679637.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 554aa MW: 60717.5 Da PI: 9.6155

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.6	6.8e-09	439	487	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r Rt ++k++w+++l XP_021679637.1 439 AWTLSEVMKLVEGVSRYGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 487 7**************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MEVKGLLIDE KSEMHIVADI GQPIGCISNE GSSSGMLLQL ESSEGLSQFE NTEVDPDKLN 60 ARLEETVPSF TPSLIDSHLH QSGSIDECSN TPVLTEGGAL PSTTVTTSKP DFSKLNGEIC 120 LDNLSIKELH ETFKATFGRE TTVKDKQWLK RRITMGLTNS CDVSATTFII KDNKLVKKGK 180 EDGCDNVDGA LAYNLAVGTT INCSQQGAPI SHGSQLEDQV VSDKRNRSTG DNSGSEDHHT 240 EQRAAKRVRK PTRRYIEELS EVESKESSGK LRTTVKSSAF GQMSSKFHFR PVRNVSSDGR 300 TVVTRLDSLG GSGIQIPCVS RVRRSRPRKN FMALLKFNPN SMGMTATLVK KALGAHSFLP 360 DNYESEKAQS APAQVQQRVR SVMYLFLGVP DKDKQFTAVG AVGGHHKVLK QVDSSGDSDD 420 NIVTVPTSKG GIRRKHHRAW TLSEVMKLVE GVSRYGAGRW SEIKRLAFAS YSYRTSVDLK 480 DKWRNLLKAS FAHIPSDKGV NSRKNAATMP IPEPILLRVR ELAERQSQVP PNLTSGKEAG 540 SSGSSVHEKQ SGYL

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MEVKGLLIDE KSEMHIVADI GQPIGCISNE GSSSGMLLQL ESSEGLSQFE NTEVDPDKLN  60
ARLEETVPSF TPSLIDSHLH QSGSIDECSN TPVLTEGGAL PSTTVTTSKP DFSKLNGEIC  120
LDNLSIKELH ETFKATFGRE TTVKDKQWLK RRITMGLTNS CDVSATTFII KDNKLVKKGK  180
EDGCDNVDGA LAYNLAVGTT INCSQQGAPI SHGSQLEDQV VSDKRNRSTG DNSGSEDHHT  240
EQRAAKRVRK PTRRYIEELS EVESKESSGK LRTTVKSSAF GQMSSKFHFR PVRNVSSDGR  300
TVVTRLDSLG GSGIQIPCVS RVRRSRPRKN FMALLKFNPN SMGMTATLVK KALGAHSFLP  360
DNYESEKAQS APAQVQQRVR SVMYLFLGVP DKDKQFTAVG AVGGHHKVLK QVDSSGDSDD  420
NIVTVPTSKG GIRRKHHRAW TLSEVMKLVE GVSRYGAGRW SEIKRLAFAS YSYRTSVDLK  480
DKWRNLLKAS FAHIPSDKGV NSRKNAATMP IPEPILLRVR ELAERQSQVP PNLTSGKEAG  540
SSGSSVHEKQ SGYL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	323	329	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-100	MYB_related family protein