PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679656.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 351aa MW: 40172.2 Da PI: 8.8845

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679656.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61.7	1.2e-19	23	112	3	99
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 k+ d+ ++g l +pkkf+++hg++ ++ ++l+ +sg +W+v+l ++g+++l+kGW+eF+k + ++ g f+vFk++g+ f +v ++ XP_021679656.1 23 KII-LDDSIREGKLEIPKKFMRKHGKDLPS--PVILKVPSGTTWQVEL--LECDGKVWLEKGWQEFAKHHSVDHGYFLVFKYEGHGHF--CVFIL 110 444.468888999*********988555..5***********..******************************997777..77776 PP -S CS B3 98 rk 99 +k XP_021679656.1 111 DK 112 65 PP
2	B3	40.9	3.6e-13	256	346	1	96
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 ffk ++ d lk + +++p +f +++ k++ + ltl+ r W vkl ++s++ + +GW F+++n L+ gD+++F+l+++ ++ ++ XP_021679656.1 256 FFKSVVRLDRLKYSSVCVPINFSRRYV--KARIVNLTLQV-ADRLWPVKL--IRYSKWkvAKFCGGWPTFARENSLEMGDVCIFELIKS-DA-MN 343 89********************995..33445566544.66***..7777774566779******************9984.33.35 PP EEE CS B3 94 vkv 96 v + XP_021679656.1 344 VFI 346 555 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MDSLERKLPI AFTIMEREPH FFKIILDDSI REGKLEIPKK FMRKHGKDLP SPVILKVPSG 60 TTWQVELLEC DGKVWLEKGW QEFAKHHSVD HGYFLVFKYE GHGHFCVFIL DKSASEIEYP 120 CKGVCTVDQN HEPVMENNED DASVEIVDNL SQRRKVGEKS PLSIDQQSCK ITRTDSTAKT 180 LDSLFPSSPA YLSNQATPST CIKVESSHCS KREYEGKLKQ STASKKNTGR QGKRPPCSSN 240 SQALEEANKF ISNNPFFKSV VRLDRLKYSS VCVPINFSRR YVKARIVNLT LQVADRLWPV 300 KLIRYSKWKV AKFCGGWPTF ARENSLEMGD VCIFELIKSD AMNVFIFRCE K

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MDSLERKLPI AFTIMEREPH FFKIILDDSI REGKLEIPKK FMRKHGKDLP SPVILKVPSG  60
TTWQVELLEC DGKVWLEKGW QEFAKHHSVD HGYFLVFKYE GHGHFCVFIL DKSASEIEYP  120
CKGVCTVDQN HEPVMENNED DASVEIVDNL SQRRKVGEKS PLSIDQQSCK ITRTDSTAKT  180
LDSLFPSSPA YLSNQATPST CIKVESSHCS KREYEGKLKQ STASKKNTGR QGKRPPCSSN  240
SQALEEANKF ISNNPFFKSV VRLDRLKYSS VCVPINFSRR YVKARIVNLT LQVADRLWPV  300
KLIRYSKWKV AKFCGGWPTF ARENSLEMGD VCIFELIKSD AMNVFIFRCE K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-44	B3 family protein