PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021680135.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 342aa MW: 38824.1 Da PI: 8.2926

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021680135.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	180	199	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C+k+F+r n++ H+ XP_021680135.1 180 FECSICSKTFNRYNNMQMHM 199 89*****************9 PP
2	zf-C2H2	16	3.3e-05	264	286	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F k + ++H +++ XP_021680135.1 264 FMCRKCGKTFAVKGDWRTHEKNC 286 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MDLWKEGNNL CFLSPTFIEW LKPSSSSSSS SSSLTSSSSS SSSVTQQIQL TNPMSILKLP 60 LLYPQEQLPH QQQEFVKETV ECLPLLSRLS EDSKTLKEEG MRVQETSTVG VKEENITVAL 120 HIGLPNSGGD SQVETKVFDF NKEEEQHAIK KSVHGHCPFN TENRFWIPTP AQILIGPMQF 180 ECSICSKTFN RYNNMQMHMW GHGSEFRRGP DSLKGTQPAA MLRLPCYCCA QGCKNNINHP 240 RAKPLKDFRT LQTHYKRKHG AKPFMCRKCG KTFAVKGDWR THEKNCGKLW YCTCGSDFKH 300 KRSLKDHIRS FGKGHSPHPS LEGFEDDKDC ITTGSEEDEF LR

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MDLWKEGNNL CFLSPTFIEW LKPSSSSSSS SSSLTSSSSS SSSVTQQIQL TNPMSILKLP  60
LLYPQEQLPH QQQEFVKETV ECLPLLSRLS EDSKTLKEEG MRVQETSTVG VKEENITVAL  120
HIGLPNSGGD SQVETKVFDF NKEEEQHAIK KSVHGHCPFN TENRFWIPTP AQILIGPMQF  180
ECSICSKTFN RYNNMQMHMW GHGSEFRRGP DSLKGTQPAA MLRLPCYCCA QGCKNNINHP  240
RAKPLKDFRT LQTHYKRKHG AKPFMCRKCG KTFAVKGDWR THEKNCGKLW YCTCGSDFKH  300
KRSLKDHIRS FGKGHSPHPS LEGFEDDKDC ITTGSEEDEF LR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-125	C2H2 family protein