PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021680496.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 222aa    MW: 24010.3 Da    PI: 5.673
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021680496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260136.78.6e-43661651100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++Cvlapyfp ++p kf ++h++FGasn++k+l+++pe++r+da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+a+la
  XP_021680496.1  66 PCAACKILRRRCAEKCVLAPYFPPTEPYKFTIAHRVFGASNIIKFLQEIPESQRTDAVSSMVYEANARIRDPVYGCAGAICQLQKQVNELQAQLA 160
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_021680496.1 161 TAQAE 165
                     99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MGNLDKAVAA ISPVAVPSPF SYSPSSSAAS PSSQSSPGIP SPSQSSPTLT PSLPPHPSPP  60
SVVLSPCAAC KILRRRCAEK CVLAPYFPPT EPYKFTIAHR VFGASNIIKF LQEIPESQRT  120
DAVSSMVYEA NARIRDPVYG CAGAICQLQK QVNELQAQLA TAQAEVVNLQ CQQANLVALI  180
CMEKMAQSNH LQEPNFEQQQ YIDTSCFLDE TNLGTSWEPL WT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.12e-65LBD family protein