PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021680732.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family B3
Protein Properties Length: 402aa    MW: 46167.7 Da    PI: 8.8508
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021680732.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.41.1e-121096698
                    ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    + +++ + + l++p +f++++g++   s   tl  + g +W+v l   k ++++++ +GW eF ++  +++g f+vF+++g+  f   v++f+
  XP_021680732.1 10 ILPNTIRDKKLRIPDNFVKKFGHD--LSAFGTLSVPGGPVWRVGL--IKADDKFWFHEGWPEFMDSYSIRVGYFLVFRYEGHAVF--SVHIFN 96
                    4566777888***********977..777889999**********..9*******************************998877..888875 PP
2B354.62e-17301390497
                     E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     vl ps+  + ++++lp  fae++ +g++     ++l+ ++g++W v++ yr+++    l++GW eF  +n+L egD+++F+l+++ +  l+v+vf
  XP_021680732.1 301 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQFSDGKQWPVRCLYRGGR--AKLSQGWYEFTLENNLGEGDVCIFELMRSIDIVLKVTVF 390
                     78899******************876743...59999999********665555..66************************9875555666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MPRPYFYKLI LPNTIRDKKL RIPDNFVKKF GHDLSAFGTL SVPGGPVWRV GLIKADDKFW  60
FHEGWPEFMD SYSIRVGYFL VFRYEGHAVF SVHIFNLSAS EINYQSNAPS GRRYLAFEEM  120
EDDDFIEYLS SSSPCLVPNS LKSKVFDEHL GQMTINKSYN PPALQNLFHE SKLNYINWSG  180
EGNLHLSKGA SISSISHVAN QGTRHVGVQF NAIELKNYAD DVKFYTPDGE IQKPKIPGRK  240
KRKIDPNDLQ PSALQEDEVE MRFRFYESSS ARKRTVTAEE RERAINAAKA FEPINPFCRV  300
VLRPSYLYRG CIMYLPSCFA EKNLNGVSGF IKLQFSDGKQ WPVRCLYRGG RAKLSQGWYE  360
FTLENNLGEG DVCIFELMRS IDIVLKVTVF HVLESARRMI PS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1234243PKIPGRKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-76B3 family protein