PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021680738.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family B3
Protein Properties Length: 416aa    MW: 47688.6 Da    PI: 7.4374
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021680738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.42e-1624112398
                     EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     k +  ++ l+++ l++p kf++++g +   s   tl+ ++gr W v+l  +k +++ ++ +GW eFv+   +++g f+vF++ g+s+f  +v +f
  XP_021680738.1  24 KLM-IASILQEKKLRIPEKFVKKYGDE--LSSIATLTVPNGRMWLVEL--EKVDRKLWFHNGWHEFVEYYSIRVGYFLVFRYGGESNF--NVYIF 111
                     444.445556667***********865..7779***************..********************************999999..99888 PP

                     - CS
              B3  98 r 98 
                     +
  XP_021680738.1 112 D 112
                     6 PP
2B362.85.5e-20304396198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+ +l ps+v +  +l +p +fa+++  +++    +tl+ ++g++W v++    ++g+  l+kGW eFv +n L+egD++vF+l++  +  l+v+
  XP_021680738.1 304 FKVILRPSYVYRGFLLHIPSSFARKYLTVTAF---ITLQVSDGKQWPVRC--VSGKGGAKLSKGWTEFVWENSLEEGDVCVFELINMIDIVLKVT 393
                     5667899*******************877655...9**************..88888999***********************998766667777 PP

                     EE- CS
              B3  96 vfr 98 
                     +fr
  XP_021680738.1 394 IFR 396
                     776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
MSQAVGPDGS DSPARGNSSC MFYKLMIASI LQEKKLRIPE KFVKKYGDEL SSIATLTVPN  60
GRMWLVELEK VDRKLWFHNG WHEFVEYYSI RVGYFLVFRY GGESNFNVYI FDLAVSEISY  120
TCNIPGSLQE PCHDNQYIVA DKRRVVDNDL IEILGSGPPC HTPISSRSEF FDKYVHCNWT  180
IAGNYEASRE KLLLRKDKYD MEEKVQSSQD IGVQVDESEL IRTADKVGLP VLGEAEGRTR  240
RRKQRTDPIE HEPIIKQEVD EIPICTSTNI ASETFTRRWR PVTPEEKRRT ISAADKFKSD  300
NPFFKVILRP SYVYRGFLLH IPSSFARKYL TVTAFITLQV SDGKQWPVRC VSGKGGAKLS  360
KGWTEFVWEN SLEEGDVCVF ELINMIDIVL KVTIFRVLED AAPVNQLPSR IMPKLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1239244TRRRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-82B3 family protein