PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021680740.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family B3
Protein Properties Length: 326aa    MW: 37289.4 Da    PI: 9.9062
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021680740.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.54.5e-1724115199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv  ++d+lk + +++p kfa+++g +   + +  l  +sg +W+v l  +k+++ +++ k+W eFv+   +  g f+vF+++g s+f  +v+
  XP_021680740.1  24 FFKVV-HEDALKDKKMMIPPKFARNFGAE--FPDEANLIVPSGDVWKVGL--TKSQNNVLFDKNWLEFVQHYSIGHGHFLVFQYKGLSNF--KVR 111
                     67766.9****************999855..7889***************..********************************998999..888 PP

                     EE-S CS
              B3  96 vfrk 99 
                     ++++
  XP_021680740.1 112 IYDT 115
                     8876 PP
2B352.31e-16236325498
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     v+++ ++++ + +++  +f ++h ++k+e   ++l+  +gr+W+v+l+ r++ +r++l+kGW  F ++n Lk+gD++ F+l++    el+v++fr
  XP_021680740.1 236 VTLRDYNFTGNYVYVKSSFSKQHLIPKPE--YIKLQLDDGREWRVQLNERRN-KRMTLGKGWLAFSRENYLKSGDICYFELMK--INELKVTIFR 325
                     455789999999***********888766..57777777********54444.4589***********************986..5666999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MAHRRGEGSS SGIACPAEAP SRRFFKVVHE DALKDKKMMI PPKFARNFGA EFPDEANLIV  60
PSGDVWKVGL TKSQNNVLFD KNWLEFVQHY SIGHGHFLVF QYKGLSNFKV RIYDTTCCEI  120
QYSPVETLNS TNTTPSPSCS LKNRIKVEST NEGDCSKRPT QSKQNQGQNK CGKRVASPET  180
PILEHHSRPR SENGKAENAK MTNDIFATGF GKLFSISESA RHSSRKFKSE SPCFDVTLRD  240
YNFTGNYVYV KSSFSKQHLI PKPEYIKLQL DDGREWRVQL NERRNKRMTL GKGWLAFSRE  300
NYLKSGDICY FELMKINELK VTIFRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.14e-22B3 family protein