PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021681364.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 691aa MW: 76225.4 Da PI: 6.6262

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021681364.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	4e-16	333	392	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_021681364.1 333 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 392 78*****************988886678446***********************98 PP
2	AP2	45.6	1.8e-14	437	486	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_021681364.1 437 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 486 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 691 aa Download sequence
MKSMNDNNNG SNNNWLGFSL SPHMKMEVAS DPQHHHHQYH HESQTPSSAA VAVSSAVPTG 60 FYVSSSHFNS PGICYGVGEN VGFHSPLSVM PLKSDGSLCI LEALTRSQPE GMVPSSPPKL 120 EDFLGGATME THQYGTHERE TMALSLDSMY YHQNTEPESN RQNSVDLHEP YRQQDQQHQG 180 QQFPVQTHPY YSGIACHGMY QTSLEEATKD AQLTDCDSQI PQMADDGMPC LKSWVDRQYS 240 THNALEQQLN STMVDDGGAT GSIGPMGCGD LQSLSLSMSP GSQSSCVTAP RQISSPTGTE 300 CMAMETKKRG PAKVGQKQPV HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH LWDNSCKKEG 360 QTRKGRQVYL GGYDMEEKAA RAYDLAALKY WGPSTHINFP LENYQEELEE MKNMSRQEYV 420 AHLRRKSSGF SRGASMYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA 480 AIKFRGVNAV TNFDITRYDV ERIMASNTLL AGDLARRNKE TETSNGAIEY NAPAQNGGEA 540 IQLPNSHANG SDWKVVLYDS PQQPQPNACV DSLDQNSISV GNYRSSSFSM AMQDIIGIDS 600 VNSSQPMVDE SATRLGTHSS NTSSLVTSLS SSREASPDKT GTTMLFAKPP LASKFVTPTN 660 GVNPWFQTAV QLRPAAISMS HLPVFAAWND T

Sequence ? help Back to Top

Protein Sequence Length: 691 aa Download sequence

MKSMNDNNNG SNNNWLGFSL SPHMKMEVAS DPQHHHHQYH HESQTPSSAA VAVSSAVPTG  60
FYVSSSHFNS PGICYGVGEN VGFHSPLSVM PLKSDGSLCI LEALTRSQPE GMVPSSPPKL  120
EDFLGGATME THQYGTHERE TMALSLDSMY YHQNTEPESN RQNSVDLHEP YRQQDQQHQG  180
QQFPVQTHPY YSGIACHGMY QTSLEEATKD AQLTDCDSQI PQMADDGMPC LKSWVDRQYS  240
THNALEQQLN STMVDDGGAT GSIGPMGCGD LQSLSLSMSP GSQSSCVTAP RQISSPTGTE  300
CMAMETKKRG PAKVGQKQPV HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH LWDNSCKKEG  360
QTRKGRQVYL GGYDMEEKAA RAYDLAALKY WGPSTHINFP LENYQEELEE MKNMSRQEYV  420
AHLRRKSSGF SRGASMYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA  480
AIKFRGVNAV TNFDITRYDV ERIMASNTLL AGDLARRNKE TETSNGAIEY NAPAQNGGEA  540
IQLPNSHANG SDWKVVLYDS PQQPQPNACV DSLDQNSISV GNYRSSSFSM AMQDIIGIDS  600
VNSSQPMVDE SATRLGTHSS NTSSLVTSLS SSREASPDKT GTTMLFAKPP LASKFVTPTN  660
GVNPWFQTAV QLRPAAISMS HLPVFAAWND T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-132	AP2 family protein