PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021681830.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 426aa MW: 48630.2 Da PI: 5.8482

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021681830.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.4	1.9e-11	221	272	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r+ah ++Er+RR+++N+ + Lr+l+P + ++ + a+i A+e++++L+ XP_021681830.1 221 QRMAHIAVERNRRKQMNEHLRVLRSLMPGS---CVQRGDHASIIGGAIEFVRELE 272 79*************************6...599*************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MFLLIDHFIT LLHFSEIYLL QVTFTGLDYS LNHHHHHQQQ DHELIKSRIG EGSGDSSNGM 60 IDYMLNNPHP HQQQLSYEFC ISTSLDKLSF ADVMQFSDFG PKLALNQTKI SEVETGIDPV 120 YFLKFPVLND KREGQSLMVP QLGGENEERF KGGSSVENKA GFVREDRVVR EEVEARISDN 180 TSVQLQLLGD QDLQNKNPIP EAKNKRKRPR TIKTSEEVES QRMAHIAVER NRRKQMNEHL 240 RVLRSLMPGS CVQRGDHASI IGGAIEFVRE LEQLLQCLES QKRRRLYGEA SRQMGDSSLA 300 IQQPQPPLFP PLPLPDDHMK LVDFETELRE ETAENKSCLA DVEVKLLGFD AMIKILSRRR 360 PGQLINTIAA LEDLELNILH INITTIEQTV LYSFNVKIES ESRFTAEDIA SSVQQIFNFI 420 HANSSM

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MFLLIDHFIT LLHFSEIYLL QVTFTGLDYS LNHHHHHQQQ DHELIKSRIG EGSGDSSNGM  60
IDYMLNNPHP HQQQLSYEFC ISTSLDKLSF ADVMQFSDFG PKLALNQTKI SEVETGIDPV  120
YFLKFPVLND KREGQSLMVP QLGGENEERF KGGSSVENKA GFVREDRVVR EEVEARISDN  180
TSVQLQLLGD QDLQNKNPIP EAKNKRKRPR TIKTSEEVES QRMAHIAVER NRRKQMNEHL  240
RVLRSLMPGS CVQRGDHASI IGGAIEFVRE LEQLLQCLES QKRRRLYGEA SRQMGDSSLA  300
IQQPQPPLFP PLPLPDDHMK LVDFETELRE ETAENKSCLA DVEVKLLGFD AMIKILSRRR  360
PGQLINTIAA LEDLELNILH INITTIEQTV LYSFNVKIES ESRFTAEDIA SSVQQIFNFI  420
HANSSM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	222	233	RMAHIAVERNRR
2	282	286	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-125	bHLH family protein